Job Description P77434 Confidence 99.85% Date Thu Jan 5 12:29:17 GMT 2012 Rank 216 Aligned Residues 362 % Identity 15% Template d1bj4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.65

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		I	D	R	L	P	P	Y	V	F	N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	.	.	.	.	.	.	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																								.	.	.	.									.	.																	.	.	.	.	.	.
Template Conservation																								.	.	.	.									.	.
Template Sequence		L	K	D	S	D	V	E	V	Y	N	I	I	K	K	E	S	N	R	Q	R	V	G	.	.	.	.	L	E	L	I	A	S	E	N	.	.	F	A	S	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	T	L	C	Q	K	R
Template Known Secondary structure						T																	S	.	.	.	.					T	T			.	.											T	S	G	G	G	T							T	T			S	S	S
Template Predicted Secondary structure																								.	.	.	.									.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.											.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	.	.	.	.	.	.	.	.	.	.	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	Q	A	Y	K	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	P	Y	K	V	N	P	D	T	G
Template Known Secondary structure						T	T			T	T	T								S	S													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A
Query Conservation
Alig confidence																																.	.	.	.	.																																									.	.	.	.	.
Template Conservation																																.	.	.	.	.																																									.	.	.	.	.
Template Sequence		Y	I	N	Y	D	Q	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	.	.	.	.	.	E	Y	A	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	.	.	.	.	.
Template Known Secondary structure		S	B															S							S	S			S			.	.	.	.	.												T	T								G	G	G						T	T	S	S			G	G	G	T		S	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.																																									.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	.	.	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence												.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation												.	.
Template Sequence		V	V	T	T	T	T	H	K	T	L	.	.	R	G	C	R	A	G	M	I	F	Y	R	K	G	V	K	S	V	D	P	A	T	G	K	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	L	E	F	K	V	Y
Template Known Secondary structure							S	S	G	G	G	.	.				S									S						T	T	T																	T	T	T	T			S																T	T	S
Template Predicted Secondary structure												.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.
Predicted Secondary structure																								.																																																.	.	.
Query SS confidence																								.																																																.	.	.
Query Sequence		A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	W	M	V	.	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	.	.	.	D	T	H	V	R	F	A
Query Conservation																								.																																																.	.	.
Alig confidence																								.																.	.													.																		.	.	.
Template Conservation																																								.	.													.
Template Sequence		Q	H	Q	V	V	A	N	C	R	A	L	S	E	A	L	T	E	L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	V	D	L	R	S	.	.	K	G	T	D	G	G	R	A	E	K	V	L	.	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	R	S	A	L	R	P	S	G	L	R	L	G
Template Known Secondary structure																			T	T				T	T	S	S		S	S	S						G	G	G	.	.	G	T											.			T	T									T	T		S		T	T	S
Template Predicted Secondary structure																																								.	.													.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		376							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	I	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I	E
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions