Job Description P77434 Confidence 99.97% Date Thu Jan 5 12:29:17 GMT 2012 Rank 118 Aligned Residues 327 % Identity 14% Template d1b9ha_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.00

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		46	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120
Predicted Secondary structure									.	.	.	.																																																																			.
Query SS confidence									.	.	.	.																																																																			.
Query Sequence		P	D	G	A	T	P	P	.	.	.	.	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	.	L	D
Query Conservation									.	.	.	.																																																																			.
Alig confidence									.	.	.	.																							.														.	.	.	.	.	.	.	.	.																						.
Template Conservation																																			.														.	.	.	.	.	.	.	.	.
Template Sequence		P	E	F	P	A	W	P	Q	Y	D	D	A	E	R	N	G	L	V	R	A	L	E	Q	G	Q	W	W	R	M	G	G	D	E	.	V	N	S	F	E	R	E	F	A	A	H	H	G	.	.	.	.	.	.	.	.	.	A	A	H	A	L	A	V	T	N	G	T	H	A	L	E	L	A	L	Q	V	M	G	V	G
Template Known Secondary structure							S	S																T	S			B	T	T	T		S		.												T	T	.	.	.	.	.	.	.	.	.		S						S													T	T
Template Predicted Secondary structure																																			.														.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A
Query Conservation
Alig confidence																																				.																					.	.	.												.	.	.
Template Conservation																																				.																					.	.	.												.	.	.
Template Sequence		P	G	T	E	V	I	V	P	A	F	T	F	I	S	S	S	Q	A	A	Q	R	L	G	A	V	T	V	P	V	D	V	D	A	A	.	T	Y	N	L	D	P	E	A	V	A	A	A	V	T	P	R	T	K	V	I	.	.	.	M	P	V	H	M	A	G	L	M	A	D	.	.	.	M	D	A	L	A	K	I	S
Template Known Secondary structure		T	T							S	S	S		T									T	T								B		T	T	.	T			B											T	T					.	.	.			B		G	G	G					.	.	.
Template Predicted Secondary structure																																				.																					.	.	.												.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																								.	.	.	.	.	.	.																																																	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		A	D	T	G	V	P	L	L	Q	D	A	A	H	A	H	G	A	R	W	Q	G	K	.	.	.	.	.	.	.	R	V	G	E	L	D	S	I	A	T	F	S	F	Q	N	G	K	L	M	T	A	G	E	G	G	A	V	V	F	P	D	G	E	T	E	K	Y	E	T	A	F	L	R	H	S	C	G	R	P	R	D
Template Known Secondary structure					T			B					T	T		T	T				T	T		.	.	.	.	.	.	.		G	G	G	S	S	S								T	T	S	S	S		S	S	S								T	T												T	B	T	T			T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
																	278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	.	.	G	L	H	E	A	G	W	M	V	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation
Template Sequence		D	R	R	Y	F	H	K	I	A	G	S	N	M	R	L	N	E	F	S	A	S	V	L	R	A	Q	L	A	R	L	D	E	Q	I	A	V	R	D	E	R	W	T	L	L	S	R	L	L	G	A	I	D	G	V	V	P	Q	G	G	D	V	R	A	D	R	N	S	H	Y	M	A	M	F	R	I	P	G	L	T	E
Template Known Secondary structure			S	S					S				B		B		B												T	T																					T	S	T	T								T	T			B				S							T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																												.	.	370	.	.	.	.	.	.	.				.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	T	H	V	R	F	A	L	I	.	.	.	E	N	R	D	R	I	R	Q	A	I	R	G	I
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation												.
Template Sequence		E	R	R	N	A	L	V	D	R	L	.	V	E	A	G	L	P	A	F	A	A	F	R	A	I	Y	R	T	D	A	F	W	E	L	G	A	P	D	E	S	V	D	A	I	A	R	R	C	P	N	T	D	A	I	S	S	D	C	V	W	L	H	H	R	V	L	L	A	G	E	P	E	L	H	A	T	A	E	I	I
Template Known Secondary structure												.			T	T										G	G	G	S						S	S			S	S								T																G	G	G	G	G	S
Template Predicted Secondary structure												.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		391	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	M	F	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	A	V	A	R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions