Job Description P77434 Confidence 99.95% Date Thu Jan 5 12:29:17 GMT 2012 Rank 143 Aligned Residues 332 % Identity 12% Template c3uwcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T
Query Conservation
Alig confidence																														.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		V	P	Y	S	Y	L	E	R	Q	F	A	D	I	E	P	Y	L	N	D	L	R	E	F	I	K	T	A	D	.	.	.	F	T	L	G	A	E	L	E	K	F	E	K	R	F	A	A	L	H	N	.	.	.	.	.	.	.	.	.	A	P	H	A	I	G	V	G	T	G	T	D	A	L	A	X	S	F	K	X	L
Template Known Secondary structure		B		S							T	S	S															T		.	.	.		S	S															T	T	.	.	.	.	.	.	.	.	.		S						S													T
Template Predicted Secondary structure																														.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
			119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V
Query Conservation		.
Alig confidence		.																																										.	.	.	.	.																										.	.	.
Template Conservation																																												.	.	.	.	.																										.	.	.
Template Sequence		N	I	G	A	G	D	E	V	I	T	C	A	N	T	F	I	A	S	V	G	A	I	V	Q	A	G	A	T	P	V	L	V	D	S	E	N	G	Y	V	I	D	P	.	.	.	.	.	E	K	I	E	A	A	I	T	D	K	T	K	A	I	X	P	V	H	Y	T	G	N	I	A	D	.	.	.	X	P	A	L	A
Template Known Secondary structure		T			T	T							S	S	S											T	T								B		T	T	S	S	B		G	.	.	.	.	.	G	G	T	G	G	G			T	T							B		G	G	G					.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.																										.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																													.	.	.	.	.																																												.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		K	I	A	K	K	H	N	L	H	I	V	E	D	A	C	Q	T	I	L	G	R	I	N	D	K	F	V	.	.	.	.	.	G	S	W	G	Q	F	A	C	F	S	L	H	P	L	K	N	L	N	V	W	S	D	A	G	V	I	I	T	H	S	D	E	Y	A	E	K	L	R	L	Y	R	N	H	G	L	I	N	R
Template Known Secondary structure							T	T								T	T		T	T				T	T			T	.	.	.	.	.	T	S	S	S	S							S	S	S	S	S	S			S	S								S												T	B	T	T				T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
					273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																													.
Query SS confidence		.	.	.																																													.
Query Sequence		.	.	.	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	.	A	G	W	M	V	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K
Query Conservation		.	.	.																																													.
Alig confidence		.	.	.																																													.
Template Conservation
Template Sequence		D	V	C	V	E	Y	G	I	N	C	R	X	D	T	I	Q	A	V	I	A	N	R	L	X	N	Q	L	E	T	I	T	E	K	R	R	G	I	A	H	L	Y	D	Q	S	F	V	D	L	S	E	F	I	D	V	P	V	R	R	E	G	V	Y	H	V	F	H	I	Y	V	L	R	V	K	Y	R	D	Q	L	F	Q
Template Known Secondary structure		T			S	S				B		B													G	G	G																			T	G	G	G	T	T	T								T	T						S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.																						.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query Sequence		K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	F	A	L	I	.	.	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Alig confidence				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation				.
Template Sequence		Y	L	.	K	D	N	G	I	E	V	K	I	H	Y	P	I	A	X	H	L	Q	P	A	A	K	S	L	G	Y	Q	Q	G	D	F	P	X	A	E	K	H	G	E	A	V	I	T	L	P	A	H	P	Y	L	T	E	E	E	I	N	Y	I	I	K	K	V	R	E	F	Y	L	E
Template Known Secondary structure				.			T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S																		T	T	S																		T
Template Predicted Secondary structure				.
Template SS confidence
		298	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions