Job Description P77434 Confidence 99.91% Date Thu Jan 5 12:29:17 GMT 2012 Rank 187 Aligned Residues 319 % Identity 10% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L
Query Conservation
Alig confidence												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		Q	V	F	N	F	S	S	G	P	A	.	.	M	L	P	A	E	V	L	K	L	A	Q	Q	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	A	E	Q	D	F	R	D	L	L	N	.	.	.	.	.	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G	V	P	L
Template Known Secondary structure								S	S	S		.	.											T				.	.	.	.	.	.	.	.	.	.	.	.	.													T	.	.	.	.	.			T	T								S		T	T
Template Predicted Secondary structure												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.														.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	.	.	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E
Query Conservation																				.	.
Alig confidence																				.	.																																																								.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		N	L	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	T	V	D	G	K	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	L	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	.	.	.	.	.
Template Known Secondary structure					T	T									S	S											T	T	T	S												T	T							G	G	G					T	T		S						S			T	T	T	T					.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	.	.	.	.	.	I
Query Conservation																																																																												.	.	.	.	.
Alig confidence								.	.																		.	.	.	.	.	.	.	.	.	.																						.	.																	.	.	.	.	.
Template Conservation								.	.																		.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		E	T	P	D	F	G	.	.	P	E	V	V	V	T	A	D	F	S	S	T	I	L	S	A	P	.	.	.	.	.	.	.	.	.	.	L	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	L	V	I	V	R	E	D	L	L	G	K	A	H	E	S	C	P	S	I	L
Template Known Secondary structure								.	.	T	T								T	T	T	T	T	S	S		.	.	.	.	.	.	.	.	.	.			G	G	G		S						T	T	T	T	T			T	T	.	.								G	G	G		S				T	T	S		G	G	G
Template Predicted Secondary structure								.	.																		.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		161	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	.	.	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	W	M	V	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		D	Y	T	V	L	N	D	N	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	Q	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	N	T	L	D	K	V	F
Template Known Secondary structure												S																T																						T		S	S					B		G	G	G	B		S	S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	I	.	.	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A	D	G
Query Conservation																																.	.
Alig confidence																			.	.	.	.										.	.
Template Conservation																			.	.	.	.
Template Sequence		L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	I	E	G	V	K	A	L	T	D	F	M	I	D	F	E	R	R	H	G
Template Known Secondary structure								T	T					B			T	T	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions