Job Description P77434 Confidence 99.93% Date Thu Jan 5 12:29:17 GMT 2012 Rank 175 Aligned Residues 312 % Identity 17% Template c3ndnC_ PDB info PDB header:lyase Chain: C: PDB Molecule:o-succinylhomoserine sulfhydrylase; PDBTitle: crystal structure of o-succinylhomoserine sulfhydrylase from2 mycobacterium tuberculosis covalently bound to pyridoxal-5-phosphate Resolution 1.85 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V
Query Conservation
Alig confidence																													.														.	.	.	.	.	.	.	.	.
Template Conservation																													.														.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	S	A	A	V	A	E	K	S	F	A	G	E	L	D	H	Y	V	Y	S	R	Y	G	N	P	T	.	V	S	V	F	E	E	R	L	R	L	I	E	G	.	.	.	.	.	.	.	.	.	A	P	A	A	F	A	T	A	S	G	M	A	A	V	F	T	S	L	G	A	L	L	G	A	G	D	R	L	V	A
Template Known Secondary structure			S	S									T	T	S	S					B	T	T	T					.													T	.	.	.	.	.	.	.	.	.		S						S	S											T	T			T	T
Template Predicted Secondary structure																													.														.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		128	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		P	N	P	S	Y	P	I	.	.	.	.	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																			.	.	.	.	.	.	.																															.	.	.
Template Conservation																															.	.	.	.	.	.	.																															.	.	.
Template Sequence		A	R	S	L	F	G	S	C	F	V	V	C	S	E	I	L	P	R	W	G	V	Q	T	V	F	V	D	G	D	.	.	.	.	.	.	.	D	L	S	Q	W	E	R	A	L	S	V	P	T	Q	A	V	F	F	E	T	P	S	N	P	M	Q	S	L	V	D	.	.	.	I	A	A	V	T	E	L	A	H	A	A
Template Known Secondary structure			S	S											T					T	T								T	T	.	.	.	.	.	.	.									T	T	S			S						S	S		T	T	T						.	.	.											T
Template Predicted Secondary structure																															.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.
Template Sequence		G	A	K	V	V	L	D	N	V	F	A	.	.	.	.	.	.	.	.	.	T	P	L	L	Q	Q	G	F	P	L	G	V	D	V	V	V	Y	S	G	T	H	I	D	G	Q	G	R	V	L	G	G	A	I	L	G	D	R	E	Y	I	D	G	P	V	Q	K	L	M	R	H	T	G	P	A	M	S	A	F	N	A
Template Known Secondary structure		T								T	T	T	.	.	.	.	.	.	.	.	.								G	G	G	T		S										S		S	S																T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.																			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																					.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	.	.	W	M	V	E	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S
Query Conservation																																					.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																															.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.
Template Sequence		W	V	.	.	.	L	L	K	G	L	E	T	L	A	I	R	V	Q	H	S	N	A	S	A	Q	R	I	A	E	F	L	N	G	H	P	S	V	R	W	V	R	Y	P	Y	L	P	S	H	P	Q	Y	D	L	A	K	R	Q	M	S	G	G	G	T	V	V	T	F	A	L	D	C	P	E	D	V	A	K	Q	R	A
Template Known Secondary structure				.	.	.																												T		T	T							T	T	S	T	T	S	T	T									S	S			S							S	S		G	G	G
Template Predicted Secondary structure				.	.	.
Template SS confidence
		260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.																						.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	H	V	R	F	A	L	I	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation									.																																																	.	.
Template Sequence		F	E	V	L	D	K	M	.	R	L	I	D	I	S	N	N	L	G	D	A	K	S	L	V	T	H	P	A	T	T	T	H	R	A	M	G	P	E	G	R	A	A	I	G	L	G	D	G	V	V	R	I	S	V	G	L	.	.	E	D	T	D	D	L	I	A	D	I	D	R	A	L
Template Known Secondary structure									.	S	S	S				S			S		S	S						G	G	G	T	T	T	S	T	T							T	T	T			T	T								S	.	.	S
Template Predicted Secondary structure									.																																																	.	.
Template SS confidence
		337	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions