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Job DescriptionP77434
Confidence100.00%DateThu Jan 5 12:29:17 GMT 2012
Rank67Aligned Residues368
% Identity14%Templatec3mebB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: structure of cytoplasmic aspartate aminotransferase from giardia2 lamblia
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG. . . . . NPDGATPPHIVEKLCTVAQRPD. . THGYSTSRGIPRLRRA
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Template Sequence  FSGFPASPPDAILNLTVLYNADTNPKK. . VNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA
Template Known Secondary structure  TTT






TT


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S
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Query Sequence  ISRWYQDRYDVEIDPESE. AIVTIGSKEGLAHLMLAT. . LDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLV. . . . . EG
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Template Sequence  AQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKD
Template Known Secondary structure 
TT
TT
S
TT

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T
TTTS



B
TT
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Query Sequence  VDFFNELERAIRES. . . YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDG. . WKAPSIMQV
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Template Sequence  GELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMF
Template Known Secondary structure  S
SSB
S
TT
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TTT




T
S
TTTSSS
T
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
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Query Sequence  PGARDVAVEFFTLSKSYNMAGWRIGFMVG. . . . . . . . . . . . . . . NKTLVSALARIKSYHDYGTFTPLQVAAIAALEGD. .
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Template Sequence  VDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRL
Template Known Secondary structure  T


TTTS

GGG



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Query Sequence  . . . . QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKA. . . . . . . . . SMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVS
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Template Sequence  LQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGL. . . . . . . . TPEHVDYLKEKWSIYLV
Template Known Secondary structure  TT


STTTT

T

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Query Sequence  PGIGFGDYGDTHVRFALI. ENRDRIRQAIRGIKAMFRA
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Template Sequence  KAGG. . . . . . . . . RMSMCGLTESNCDYVAEAIHDAVTK
Template Known Secondary structure  TGGG.........GGG

TTT
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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