Job Description P77434 Confidence 99.85% Date Thu Jan 5 12:29:17 GMT 2012 Rank 214 Aligned Residues 326 % Identity 14% Template c3m5uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni Resolution 2.15 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.
Query Sequence		E	D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	.	.	.	.	.	.	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E
Query Conservation																																											.	.	.	.	.	.
Alig confidence											.	.																															.	.	.	.	.	.																			.	.
Template Conservation											.	.																																																							.	.
Template Sequence		X	R	K	I	N	F	S	A	G	.	.	P	S	T	L	P	L	E	I	L	E	Q	A	Q	K	E	L	C	D	Y	Q	G	R	G	Y	S	I	X	E	I	S	H	R	T	K	V	F	E	E	V	H	F	G	A	Q	E	K	A	K	K	L	Y	E	L	N	.	.	D	D	Y	E	V	L	F	L	Q	G	G	A	S
Template Known Secondary structure									S	S	.	.	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		S	S	S																			T			.	.	T	T							S	S
Template Predicted Secondary structure											.	.																																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	.	.	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C
Query Conservation																											.	.
Alig confidence																											.	.																														.	.	.
Template Conservation																																																										.	.	.
Template Sequence		L	Q	F	A	X	I	P	X	N	L	A	L	N	G	V	C	E	Y	A	N	T	G	V	W	T	K	K	A	I	K	E	A	Q	I	L	G	V	N	V	K	T	V	A	S	S	E	E	S	N	F	D	H	I	P	R	V	.	.	.	E	F	S	D	N	A	D	Y	A	Y	I	C	S	N	N	T	I	Y	G	T	Q
Template Known Secondary structure														S	S								S													T	T										T	T	T	T	S		S					.	.	.				T	T	S	S						S			T	T	T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation				.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		Y	Q	.	.	.	.	.	.	.	.	.	N	Y	P	K	T	K	T	P	L	I	V	D	A	S	S	D	F	F	S	R	K	.	.	.	.	.	.	.	.	.	.	V	D	F	S	N	I	A	L	F	Y	G	G	V	Q	K	N	A	G	I	S	G	L	.	.	S	C	I	F	I	R	K	D	X	L	E	R	S	K
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.	S					S	S							G	G	G	T	T	S	S		.	.	.	.	.	.	.	.	.	.				T	T								T	T	T	T	S	S		T	T		.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		154	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.
															268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.					.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	.	.	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	.	G	W	M	V	E	M	P	K	.	.	.	.	A	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.									.	.	.	.
Template Conservation
Template Sequence		N	K	Q	I	P	S	X	L	N	Y	L	T	H	A	E	N	Q	S	L	F	N	T	P	P	T	F	A	I	Y	X	F	N	L	E	X	D	W	L	L	N	Q	G	G	L	D	K	V	H	E	K	N	S	Q	K	A	T	X	L	Y	E	C	I	D	L	S	N	G	F	Y	K	G	H	A	D	K	K	D	R	S	L
Template Known Secondary structure		T					G	G	G								T	T	T		S	S																			T	T	T																						T	S	T	T	S				S	S		G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	I	.	.	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A
Query Conservation																																																				.	.
Alig confidence											.	.	.																								.	.	.	.												.	.
Template Conservation											.	.	.																								.	.	.	.
Template Sequence		X	N	V	S	F	N	I	A	K	.	.	.	N	K	D	L	E	P	L	F	V	K	E	A	E	E	A	G	X	I	G	L	K	G	H	.	.	.	.	R	I	L	G	G	I	R	A	S	I	Y	N	A	L	N	L	D	Q	V	K	T	L	C	E	F	X	K	E	F	Q	G	K
Template Known Secondary structure		S							S	S	.	.	.		T	T												T	T					B			.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure											.	.	.																								.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions