Job Description P77434 Confidence 99.76% Date Thu Jan 5 12:29:17 GMT 2012 Rank 229 Aligned Residues 257 % Identity 13% Template c3gwpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution Resolution 2.90 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																														.																									.	.	.
Query SS confidence																														.																									.	.	.
Query Sequence		P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	.	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	.	.	.	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V
Query Conservation																														.																									.	.	.
Alig confidence																														.															.	.	.	.	.						.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		L	K	V	L	N	A	F	Q	E	E	R	I	S	E	A	H	F	T	N	S	S	G	Y	G	Y	G	D	I	G	R	D	S	L	D	A	V	Y	A	R	V	F	N	T	.	.	.	.	.	E	S	A	L	V	R	P	H	F	V	N	G	T	H	A	L	G	A	A	L	F	G	N	L	R	P	G	N	T	X	L	S
Template Known Secondary structure											T	T			G	G	G	S					T	T		T	T															T	T		.	.	.	.	.	S					B	T	T			S															T	T
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		128	.	130													.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query Sequence		P	N	P	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	.	.	.	F	P	S	N	P	T	A	Q	C	V	E	L	E	F
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																										.	.																						.	.	.
Template Conservation																																										.	.
Template Sequence		V	C	G	E	P	Y	D	T	L	H	D	V	I	G	I	T	E	N	S	N	X	G	S	L	K	E	F	G	I	N	Y	K	Q	V	D	L	K	E	D	G	.	.	K	P	N	L	E	E	I	E	K	V	L	K	E	D	E	S	I	T	L	V	H	I	Q	R	S	T	G	Y	G	W	R	R	A	L	L	I	E	D
Template Known Secondary structure		S	S	S	S			T	T						T	S	S				T	T			T	G	G	G	T								B		T	T	S	.	.	S	B													T	T									S		T	T		S	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		F	E	K	V	V	A	L	A	K	R	Y	D	.	.	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K
Query Conservation														.	.
Alig confidence														.	.																				.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		I	K	S	I	V	D	C	V	K	N	I	R	K	D	I	I	C	F	V	D	N	C	Y	G	E	F	X	D	T	K	E	P	T	.	.	.	.	.	.	.	.	D	V	G	A	D	L	I	A	G	S	L	I	N	I	G	G	G	I	A	P	T	G	G	Y	L	A	G	T	K	D	C	I	E	K	T	S	Y	R	L
Template Known Secondary structure														T	T	S							T	T		T	T	S	S	S	S		G	G	.	.	.	.	.	.	.	.	G	G	T		S									T	T	T	T	T			S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230									.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	W	M	V	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	P	G	I	G	G	E	C	G	S	T	F	G	V	V	R	S	X	Y	Q	G	L	F	L	A	P	H	I	S	X	E	A	L	K	G	A	I	L	C	S	R	I	X	E	L	A	G	F	E	V	X	P
Template Known Secondary structure		S		T	T	T	G	G	G	S				T	T																																	T	T					S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions