Phyre 2 alignment of P77434 with c3getA

Job Description P77434
Confidence 100.00% Date Thu Jan 5 12:29:17 GMT 2012

Rank 70 Aligned Residues 357

% Identity 17% Template c3getA_

PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (np_281508.1) from campylobacter jejuni at 2.01 a resolution

Resolution 2.01 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence	T	R	I	D	R	L	P	P	Y	V	F	N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R
Query Conservation
Alig confidence																					.																																		.	.								.															.	.
Template Conservation																					.																																		.	.								.															.	.
Template Sequence	E	F	L	N	N	L	S	N	Y	E	P	G	K	D	I	E	V	I	A	K	.	E	Y	G	V	K	E	V	I	K	L	A	S	N	E	N	P	F	G	T	P	P	K	A	I	E	C	L	R	Q	N	A	N	K	.	.	A	H	L	Y	P	D	D	.	S	X	I	E	L	K	S	T	L	A	Q	K	Y	K	.	.
Template Known Secondary structure	G	G	G	G	G	S															.		T	T		S						S	S				T	T		S												G	G	G	.	.	T	T	S				T	.	T													T	.	.
Template Predicted Secondary structure																					.																																		.	.								.															.	.
Template SS confidence
	5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.

	91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P
Query Conservation
Alig confidence	.	.	.	.	.																																																												.	.
Template Conservation	.	.	.	.	.																																																												.	.
Template Sequence	.	.	.	.	.	V	Q	N	E	N	I	I	I	G	A	G	S	D	Q	V	I	E	F	A	I	H	S	K	L	N	S	K	N	A	F	L	Q	A	G	V	T	F	A	X	Y	E	I	Y	A	K	Q	C	G	A	K	C	Y	K	T	Q	S	I	T	H	.	.	N	L	D	E	F	K	K	L	Y	E	T	H	K	D
Template Known Secondary structure	.	.	.	.	.			G	G	G					S	S															T	T							S	S			T										T							S	S	S	S		.	.												T	T	T
Template Predicted Secondary structure	.	.	.	.	.																																																												.	.
Template SS confidence
						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.

	171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	.	.	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M
Query Conservation																																																							.	.
Alig confidence																																			.																				.	.																					.
Template Conservation																																			.																																										.
Template Sequence	E	I	K	L	I	F	L	C	L	P	N	N	P	L	G	E	C	L	D	A	S	E	A	T	E	F	I	K	G	V	N	E	D	C	.	L	V	V	I	D	A	A	Y	N	E	F	A	S	F	K	D	S	K	K	H	L	E	P	C	E	L	I	K	E	F	D	N	V	L	Y	L	G	T	F	S	L	.	Y	G	L
Template Known Secondary structure	T								S	S		T	T	T															T	S		T	T	S	.							T	T									G	G	G												T	T										.		S
Template Predicted Secondary structure																																			.																																										.
Template SS confidence
	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.

	249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	W	M	V	E	M	P	K	A	S	M
Query Conservation
Alig confidence																								.	.																				.																																	.
Template Conservation																								.	.																				.																																	.
Template Sequence	G	G	L	R	I	G	Y	G	I	A	N	A	N	I	I	S	A	F	Y	K	L	R	A	.	.	P	F	N	V	S	N	L	A	L	K	A	A	V	A	A	X	D	D	D	.	E	F	T	E	K	T	L	E	N	N	F	S	Q	X	E	L	Y	K	E	F	A	K	K	H	N	I	K	I	I	D	S	Y	.	T	N
Template Known Secondary structure	T	T	T																			S		.	.	T	T		S													T			.																								T	T							S	.	S	S
Template Predicted Secondary structure																								.	.																				.																																	.
Template SS confidence
	231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.

	329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	I	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R
Query Conservation
Alig confidence								.	.	.	.															.											.	.	.											.
Template Conservation								.	.	.	.															.											.	.	.											.
Template Sequence	F	I	T	Y	F	F	D	.	.	.	.	E	K	N	S	T	D	L	S	E	K	L	L	K	K	.	G	I	I	I	R	N	L	K	S	Y	.	.	.	G	L	N	A	I	R	I	T	I	G	.	T	S	Y	E	N	E	K	F	F	T	E	F	D	K	I	L	R
Template Known Secondary structure							S	.	.	.	.	S	S											T	T	.	T							G	G	G	.	.	.	T		S								.
Template Predicted Secondary structure								.	.	.	.															.											.	.	.											.
Template SS confidence
	307	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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