Job Description P77434 Confidence 99.91% Date Thu Jan 5 12:29:17 GMT 2012 Rank 190 Aligned Residues 338 % Identity 14% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	N	P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A
Query Conservation
Alig confidence																															.	.	.	.	.	.																.	.																						.	.	.	.
Template Conservation																															.	.	.	.	.	.																.	.																						.	.	.	.
Template Sequence		A	S	V	R	G	A	I	L	K	E	L	E	R	Q	Q	S	Q	V	E	L	I	A	S	E	N	I	V	S	R	.	.	.	.	.	.	A	V	L	D	A	Q	G	S	V	L	T	N	K	Y	A	.	.	E	G	Y	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	.	.	.	.	H	A	N
Template Known Secondary structure																		S					T	T							.	.	.	.	.	.							T	S	G	G	G	S	S		T	.	.	T																	T	T		S	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.																.	.																						.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	A	K	P	G	D	T	V	L	G	M	S	L	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	Y	G	V	S	R	D	T	M	L	.	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	S	L	I	I	A	G	F	S
Template Known Secondary structure					S	S															T	T											.	.	.	.	.	.	.	.	.	.	.	.	.						B		T	T	T		S	.	B															S							S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.														.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T
Query Conservation
Alig confidence			.							.	.	.																																				.	.	.	.	.															.	.
Template Conservation			.							.	.	.																																				.	.	.	.	.															.	.
Template Sequence		A	.	Y	P	R	K	L	D	.	.	.	F	A	R	F	R	A	I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	.	.	.	.	.	E	H	A	H	V	V	T	S	T	T	H	K	T	L	.	.	R	G	P	R	G	G	F	V	L	T	N	D	E
Template Known Secondary structure			.		S	S				.	.	.											T	T								T	T	T						T	T	S	S			G	G	.	.	.	.	.	G	T		S						S	S	G	G	G	.	.		S		S							S
Template Predicted Secondary structure			.							.	.	.																																				.	.	.	.	.															.	.
Template SS confidence
		181		.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	W	M	V	.	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A
Query Conservation																																																														.
Alig confidence		.	.	.																																																										.																.	.
Template Conservation		.	.	.																																																																										.	.
Template Sequence		.	.	.	E	I	A	K	K	I	N	S	A	V	G	P	L	M	H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	.	.	K	G
Template Known Secondary structure		.	.	.																												T	S																								T	T				G	G	G	S		S	S	S							G	G	.	.	G	T
Template Predicted Secondary structure		.	.	.																																																																										.	.
Template SS confidence
					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																				.	.	.	.																			.	.	.	.	.	.
Query SS confidence																				.	.	.	.																			.	.	.	.	.	.
Query Sequence		M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	.	.	.	.	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	.	.	.	.	.	.	I	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A	D	G	L	L	P	A
Query Conservation																				.	.	.	.																			.	.	.	.	.	.
Alig confidence												.								.	.	.	.																			.	.	.	.	.	.
Template Conservation												.
Template Sequence		L	K	G	A	Q	V	E	Q	A	L	.	E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A	L	R	T	N	P	E
Template Known Secondary structure												.			T	T									T	T		S	S		T	T	T		S												T	T																					T	T		T	T
Template Predicted Secondary structure												.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions