Job Description P77434 Confidence 100.00% Date Thu Jan 5 12:29:17 GMT 2012 Rank 57 Aligned Residues 365 % Identity 16% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																.	.	.																				.	.	.
Query SS confidence																																.	.	.																				.	.	.
Query Sequence		P	Y	V	F	N	I	T	A	E	L	K	M	A	A	R	R	R	G	E	D	I	I	D	F	S	M	G	N	P	D	.	.	.	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	.	.	.	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y
Query Conservation																																.	.	.																				.	.	.
Alig confidence																							.									.	.	.																				.	.	.																							.	.	.
Template Conservation																							.																																																								.	.	.
Template Sequence		A	Q	V	R	E	E	V	T	A	K	Y	A	E	L	K	A	K	N	L	S	L	.	D	L	T	R	G	K	P	S	A	E	Q	L	D	L	S	N	D	L	L	S	L	P	G	G	D	F	R	T	K	D	G	V	D	C	R	N	Y	G	G	L	L	G	I	A	D	I	R	E	L	W	A	E	A	L	G	.	.	.
Template Known Secondary structure			T	T														T					.		S				S								T	T	G	G	G	G	G		S	T	T			B		T	T			B	T	T	S	S			S	S														T	.	.	.
Template Predicted Secondary structure																							.																																																								.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	R	H	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	E	G	P	D
Template Known Secondary structure		.	.	.	.			G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S												T	T										T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.
Predicted Secondary structure																																																.																								.	.	.	.	.
Query SS confidence																																																.																								.	.	.	.	.
Query Sequence		F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	.	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	.	.	.	.	.	M	Q	V	P	G
Query Conservation																																																.																								.	.	.	.	.
Alig confidence												.																																				.																								.	.	.	.	.
Template Conservation												.
Template Sequence		X	G	V	V	R	E	L	V	K	D	.	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G
Template Known Secondary structure									T	T	S	.	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S	S	S																T
Template Predicted Secondary structure												.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	.	.	.	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D
Query Conservation																																																												.	.	.
Alig confidence																	.																																											.	.	.
Template Conservation																	.
Template Sequence		N	P	N	R	F	W	F	X	S	S	T	S	K	I	T	.	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E
Template Known Secondary structure			T	T								S	T	T	T	S	.		T	T	S	S																							S																S
Template Predicted Secondary structure																	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		309	310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.	.	.	.	.		.
Predicted Secondary structure											.	.	.	.	.																																																		.	.	.	.												.
Query SS confidence											.	.	.	.	.																																																		.	.	.	.												.
Query Sequence		V	L	V	K	G	L	H	E	A	.	.	.	.	.	G	W	M	V	E	M	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	.	.	.	.	Y	G	D	T	H	V	R	F	A	L	I	.	E
Query Conservation											.	.	.	.	.																																																		.	.	.	.												.
Alig confidence											.	.	.	.	.																				.	.	.	.	.																										.	.	.	.												.
Template Conservation																																			.	.	.	.	.
Template Sequence		R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	.	.	.	.	.	G	T	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P	N	N	E	N	I	R	L	A	P	S	L	P
Template Known Secondary structure												G	G	G		S							S	B	S	S							S	T	.	.	.	.	.	T												T	T						T	T	T	T	S	G	G	G			T	T	S								S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	E	L	E	V	A	X	D	G	F	A	T	C	V	L	X	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions