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Job DescriptionP77434
Confidence99.97%DateThu Jan 5 12:29:17 GMT 2012
Rank115Aligned Residues345
% Identity13%Templatec3caiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:possible aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis rv3778c2 protein
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70. ........80.........90......
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Query Sequence  TAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCTVAQRPDTHGYS. . . . . . . TSRGIPRLRRAISRWYQDRYDVEID
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Template Sequence  VARVRGLHPSLGDGWVHFDAPAGM. LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVN. . . . . . . A
Template Known Secondary structure  T
TTTTSS

BGGG

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SSS
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   5....10.........20........ .30.........40.........50.........60.........70..... .
 
   97..100.........110........ .120.........130... ......140.........150.........160.........
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Query Sequence  PESEAIVTIGSKEGLAHLMLAT. . . LDHGDTVLVPNPSYP. . . . IHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESY
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Template Sequence  DPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE. TGELPTWQWESLIS
Template Known Secondary structure 
GGGS
TGGGGBTT
TTS
GGGTB



TT.T



GGG

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   77..80.........90.........100.........110.........120.........130.........140. ........150.....
 
   170.........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  PKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMA
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Template Sequence  KSTRLVAVNSASGTLGGV. . . TDLRAMTKLVHDVGALVVVDHSAAAPYRLLD. . . . . . . . IRETDADVVTVNAHAWGGPP
Template Known Secondary structure  TTSB
TTT
BB...


TT

TTTTTT



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SGGGGTS
S
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   156...160.........170... ......180.........190.........200.... .....210.........220....
 
   250.........260.........270..... ....280.........290 .........300.....
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Query Sequence  GWRIGFMVGNKTLVSALARIKSYHDY. . . . . . . . . GTFTPLQVAAIAALE. . . . . . . . . . . . . . . GDQQCVRDIAEQYKR
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Template Sequence  I. . GAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNR
Template Known Secondary structure 
..S
TS



S
TT

GGGGG

S


TSSTT

SS
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   225 ....230.........240.........250.........260.........270.........280.........290.........300..
 
   306...310...... ...320.........330.........340.........350.........360.... .....370.......
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Query Sequence  RRDVLVKGLHE. AGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGF. . . . . . . GDYGDTHVRFALI
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Template Sequence  VFDYLMVSLRSLPLVMLIGRPEAQIPVVSF. . AVHKVPADRVVQRL. ADNGILAIANTGSRVLDVLGVNDVGGAVTVGLA
Template Known Secondary structure  T
TT



SSB
S..TTB
.TT


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TTTTTT



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   303......310.........320.........330.. .......340...... ...350.........360.........370.........
 
   378.380.........390...
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Query Sequence  . . ENRDRIRQAIRGIKAM
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Template Sequence  HYSTMAEVDQLVRALASL
Template Known Secondary structure  TT

T
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   380.........390.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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