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Job DescriptionP77434
Confidence100.00%DateThu Jan 5 12:29:17 GMT 2012
Rank41Aligned Residues363
% Identity29%Templatec2z61A_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable aspartate aminotransferase 2; PDBTitle: crystal structure of mj0684 from methanococcus jannaschii2 reveals its similarity in the active site to kynurenine3 aminotransferases
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  TRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDR
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Template Sequence  KRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKE. GKTHYTDSRGILELREKISELYKDK
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TTTT






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   4.....10.........20.........30.........40.........50....... ..60.........70.........80..
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  YDVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYP
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Template Sequence  YKADIIP. DNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD. . . . . . . . FTVESLEEALSD
Template Known Secondary structure  SS



G.GGSS

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   83...... 90.........100.........110.........120.........130.........140. ........150...
 
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Query Sequence  KPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAG
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Template Sequence  KTKAIIINSPSNPLGEVID. . . . REIYEFAYENIPYIISDEIYNGLVYEGK. CYSAIEFDENLEKTILINGFSL. YAMTG
Template Known Secondary structure  SSS
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GGGT
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Query Sequence  WRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALE. GDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMY
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Template Sequence  WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYY
Template Known Secondary structure  G



TSSS
GGGGSTT
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Query Sequence  VWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF
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Template Sequence  VFPNIGE. . . . . DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFL
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B
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GGGG
GGGSSB

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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