 |
Job Description | P77434 | Confidence | 64.77% | Date | Thu Jan 5 12:29:17 GMT 2012 |
Rank | 247 | Aligned Residues | 124 |
% Identity | 15% | Template | c2pqmA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:cysteine synthase; |
PDBTitle: crystal structure of cysteine synthase (oass) from entamoeba2 histolytica at 1.86 a resolution
|
Resolution | 1.86 Å |
|
 |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | R | G | I | P | R | L | R | R | A | I | S | R | W | Y | Q | D | R | Y | D | V | E | I | D | P | E | S | E | A | I | V | T | I | G | S | K | E | G | L | A | H | L | M | L | A | T | . |
L | D | H | G | D | T | V | L | V | P | N | P | S | Y | P | I | H | I | Y | G | A | V | I | A | G | A | Q | V | R | S | V | P |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|   |
|   |
Template Sequence |   |
N | P | M | S | S | V | K | D | R | V | G | F | N | I | V | Y | Q | A | I | K | D | G | R | L | K | P | G | M | E | I | I | E | S | T | S | G | N | T | G | I | A | L | C | Q | A | G | A | V | F | G | Y | R | V | N | I | A | M | P | S | T | M | S | V | E | R | Q | M | I | M | K | A | F | G | A | E | L | I | L | T | E |
Template Known Secondary structure |   |
S | T | T | S | B | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
| T | T |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | E | G | V | D | F | F | N | E | L | E | R | A | I | R | E | S | Y | P | K | P | K | M | M | I | . |
. |
L | G | F | P | S | N | P | T | A | Q | C | V | E | L | E | F | F | E | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
G | K | K | G | M | P | G | A | I | E | E | V | N | K | M | I | K | E | N | P | G | K | Y | F | V | A | N | Q | F | G | N | P | D | N | T | A | A | H | H | Y | T | A | N | E | I | W | E |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T |  |  |  |
|
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|