Job Description P77434 Confidence 99.86% Date Thu Jan 5 12:29:17 GMT 2012 Rank 211 Aligned Residues 339 % Identity 11% Template c2jisA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cysteine sulfinic acid decarboxylase; PDBTitle: human cysteine sulfinic acid decarboxylase (csad) in2 complex with plp. Resolution 1.6 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		P	D	G	A	T	P	P	H	I	V	E	K	L	C	T	V	A	Q	R	P	D	T	H	G	Y	S	T	S	R	G	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																																		.	.	.																									.	.	.	.	.
Template Conservation																																																		.	.	.
Template Sequence		F	S	G	L	D	P	H	A	L	A	G	R	I	I	T	E	S	L	N	T	S	Q	Y	T	Y	E	I	A	P	V	F	V	L	M	E	E	E	V	L	R	K	L	R	A	L	V	G	W	.	.	.	S	S	G	D	G	I	F	C	P	G	G	S	I	S	N	M	Y	A	V	N	L	A	R	Y	Q	R	Y	P	D
Template Known Secondary structure																							T	T		T	T	T																				T		.	.	.	S	S							S	S																		T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
											121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																									.	.	.																											.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																									.	.	.																											.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I	A	G	A	.	.	.	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	.	.	.	.	.	.	K	P	K	M	M	I	L	G	F	P	S	N
Query Conservation		.	.	.	.	.	.	.	.	.																									.	.	.																											.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																									.	.	.												.	.														.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		C	K	Q	R	G	L	R	T	L	P	P	L	A	L	F	T	S	K	E	C	H	Y	S	I	Q	K	G	A	A	F	L	G	L	G	T	D	S	V	R	V	V	K	A	D	E	R	G	.	.	K	M	V	P	E	D	L	E	R	Q	I	G	M	A	E	A	E	G	A	V	P	F	L	V	S	A	T	S	G	T	T
Template Known Secondary structure							G	G	G	S									T	T	S		T									T	T	S		G	G	G						B		T	T	S	.	.		B															T	T										B	S		T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V	Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	W	R	I	G	F	M	V	G	N	K	T	L
Query Conservation
Alig confidence							.	.	.																																																	.	.
Template Conservation							.	.	.																																																	.	.
Template Sequence		V	L	G	A	F	.	.	.	D	P	L	E	A	I	A	D	V	C	Q	R	H	G	L	W	L	H	V	D	A	A	W	G	G	S	V	L	L	S	Q	T	H	R	H	L	L	D	G	I	Q	R	A	D	S	V	A	W	.	.	N	P	H	K	L	L	A	A	G	L	Q	C	S	A	L	L	L	Q	D	T	S	N
Template Known Secondary structure		T	T			B	.	.	.														T								T	T	G	G	G	G	G	G		T	T	T	G	G	G	G	T	T	G	G	G		S					.	.		T	T	S	T	T				S								S			S
Template Predicted Secondary structure							.	.	.																																																	.	.
Template SS confidence
		249	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		263	.	.	.	.	.												.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																																																		.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.																																																		.
Query Sequence		V	S	A	L	A	R	.	.	.	.	.	.	.	.	.	.	.	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C	V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	.	G	W	M	V	E	M	P	K	A	S	M	Y	V
Query Conservation								.	.	.	.	.	.	.	.	.	.	.																																																		.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																																																		.
Template Conservation
Template Sequence		L	L	K	R	C	H	G	S	K	F	Y	D	V	A	L	D	T	G	D	K	V	V	Q	C	G	R	R	V	D	C	L	K	L	W	L	M	W	K	A	Q	G	D	Q	G	L	E	R	R	I	D	Q	A	F	V	L	A	R	Y	L	V	E	E	M	K	K	R	E	G	F	E	L	V	M	E	P	E	F	V	N	V
Template Known Secondary structure												S		G	G	G			G	G	G		S		S	S																																								T	S	T	T				S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.														.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.				.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query Sequence		W	A	K	I	P	E	P	Y	A	A	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G	I	G	F	G	D	Y	G	D	T	H	V	R	F	A	L	I	.	.	.	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.													.	.	.
Template Conservation																																																.	.
Template Sequence		C	F	W	F	V	P	P	S	L	R	G	K	Q	E	S	P	D	Y	H	E	R	L	S	K	V	A	P	V	L	K	E	R	M	V	K	E	G	S	M	M	I	G	Y	Q	P	H	.	.	G	T	R	G	N	F	F	R	V	V	V	A	N	S	A	L	T	C	A	D	M	D	F	L	L	N	E	L	E	R	L	G
Template Known Secondary structure								G	G	G	T	T		T	T	S	T	T							T													T	S									.	.	T	T												T	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		395	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		491	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions