Job Description P77434 Confidence 99.91% Date Thu Jan 5 12:29:17 GMT 2012 Rank 189 Aligned Residues 298 % Identity 14% Template c1ibjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase; PDBTitle: crystal structure of cystathionine beta-lyase from arabidopsis2 thaliana Resolution 2.30 Å

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		64	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		R	P	D	T	H	G	Y	S	T	S	R	G	.	.	I	P	R	L	R	R	A	I	S	R	W	Y	Q	D	R	Y	D	V	E	I	D	P	E	S	E	A	I	V	T	I	G	S	K	E	G	L	A	H	L	M	L	A	T	L	D	H	G	D	T	V	L	V	P	N	P	S	Y	P	I	H	I	Y	G	A	V	I
Query Conservation														.	.
Alig confidence														.	.														.	.	.	.	.	.	.	.	.																			.
Template Conservation																													.	.	.	.	.	.	.	.	.																			.
Template Sequence		E	N	G	P	Y	D	Y	T	R	S	G	N	P	T	R	D	A	L	E	S	L	L	A	K	L	D	K	.	.	.	.	.	.	.	.	.	A	D	R	A	F	C	F	T	S	G	M	A	A	L	S	A	V	T	.	H	L	I	K	N	G	E	E	I	V	A	G	D	D	V	Y	G	G	S	D	R	L	L	S	Q
Template Known Secondary structure					S		S	B	T	T	T																	T	.	.	.	.	.	.	.	.	.		S						S	S										.	T	T	S		T	T							T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		142					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		A	.	.	.	.	G	A	Q	V	R	S	V	P	L	V	E	G	V	D	F	F	N	E	L	E	R	A	I	R	E	S	Y	P	K	P	K	M	M	I	L	G	F	P	S	N	P	T	A	Q	C	V	E	L	E	F	F	E	K	V	V	A	L	A	K	R	Y	D	V	L	V	V	H	D	L	A	Y	A	D	I	V
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.											.	.	.	.	.	.	.																															.	.	.
Template Conservation																	.	.	.	.	.	.	.																															.	.	.
Template Sequence		V	V	P	R	S	G	V	V	V	K	R	V	N	T	T	.	.	.	.	.	.	.	K	L	D	E	V	A	A	A	I	G	P	Q	T	K	L	V	W	L	E	S	P	T	N	P	R	Q	Q	I	S	D	.	.	.	I	R	K	I	S	E	M	A	H	A	Q	G	A	L	V	L	V	D	N	S	I	M	S	P	V
Template Known Secondary structure		T	G	G	G	G	T								T	T	.	.	.	.	.	.	.											T	T								S	S		T	T	T						.	.	.										T	T	T								T	T	T		T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		Y	D	G	W	K	A	P	S	I	M	Q	V	P	G	A	R	D	V	A	V	E	F	F	T	L	S	K	S	Y	N	M	A	G	.	.	W	R	I	G	F	M	V	G	N	K	T	L	V	S	A	L	A	R	I	K	S	Y	H	D	Y	G	T	F	T	P	L	Q	V	A	A	I	A	A	L	E	G	D	Q	Q	C
Query Conservation																																			.	.
Alig confidence					.	.	.	.	.	.	.	.	.																						.	.
Template Conservation					.	.	.	.	.	.	.	.	.
Template Sequence		L	S	R	.	.	.	.	.	.	.	.	.	P	L	E	L	G	A	D	I	V	M	H	S	A	T	K	F	I	A	G	H	S	D	V	M	A	G	V	L	A	V	K	G	E	K	L	A	K	E	V	Y	F	L	Q	N	S	E	G	S	G	L	A	P	F	D	C	W	L	C	L	R	G	I	K	T	M	A	L	R
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	G	G	G	G	T		S						T	T	T	T	T	T		S	S										S	S														T	T		B														T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.										.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.															.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	D	I	A	E	Q	Y	K	R	R	R	D	V	L	V	K	G	L	H	E	A	G	W	M	V	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	S	M	Y	V	W	A	K	I	P	E	P	Y	A	A	M	G	S	L	E	F	A	K	K	L	L	N	E	A	K	V	C	V	S	P	G
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		I	E	K	Q	Q	E	N	A	R	K	I	A	M	Y	L	S	S	H	P	R	V	K	K	V	Y	Y	A	G	L	P	D	H	P	G	H	H	L	H	F	S	Q	A	K	G	A	G	S	V	F	S	F	I	T	G	S	V	A	.	.	.	.	L	S	K	H	L	V	E	T	T	K	Y	F	S	I	A	V	S	F	G
Template Known Secondary structure																		T		T	T							T	T	S	T	T		T	T					T	T	S		S				S							S				.	.	.	.										S	S	S				S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.					.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		362	.	.	.	.	.																						.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	F	G	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	T	H	V	R	F	A	L	I	E	N	R	D	R	I	R	Q	A	I	R	G	I	K	A	M	F	R	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																								.	.
Template Sequence		S	V	K	S	L	I	S	M	P	C	F	M	S	H	A	S	I	P	A	E	V	R	E	A	R	G	L	T	E	D	L	V	R	I	S	A	G	I	.	.	E	D	V	D	D	L	I	S	D	L	D	I	A	F	K	T
Template Known Secondary structure		S	S	S						T	T	T	T	T	T	T	T			S	S	T	T	T	T	S	S			T	T								S	.	.	S														T	T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions