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Job DescriptionP77434
Confidence99.92%DateThu Jan 5 12:29:17 GMT 2012
Rank179Aligned Residues347
% Identity16%Templatec1i41J_
PDB info PDB header:lyaseChain: J: PDB Molecule:cystathionine gamma-synthase; PDBTitle: cystathionine gamma-synthase in complex with the inhibitor2 appa
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50 .........60.........70..... ....80.........90.
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Query Sequence  PYVFNITAELKMAARRRGEDIIDFSMGNPDGAT. . . . PPHIVEKLCTVAQRPDTHGYSTSRG. . IPRLRRAISRWYQDRY
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Template Sequence  SFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEG. . .
Template Known Secondary structure  TT

STTTTT

SS

S
SS





SB


S
TTSS



BGGG

T...
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   52.......60.........70.........80.........90.........100.........110.........120........
 
   92.......100.........110.........120.........130.........140.. .......150.........160.......
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Query Sequence  DVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIA. . . . GAQVRSVPLVEGVDFFNELERAIRE
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Template Sequence  . . . . . . AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA. . . . . . DVGALELAL
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SSSS
TT
SS

TGGGGT

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   129130.........140.........150.........160.........170.........180....... ..190......
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  SYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYN
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Template Sequence  NQKKVNLFFTESPTNPFLRCVD. . . IELVSKLCHEKGALVCIDGTFATPLNQK. . . . . . . . . ALALGADLVLHSATKFLG
Template Known Secondary structure  S

SS
TTT




...TT

TTT

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STTTTTT
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   197..200.........210........ .220.........230.........240...... ...250.........260....
 
   248.250 .........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  MAG. WRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVE. . . .
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Template Sequence  GHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQS
Template Known Secondary structure 
SSS



T



TT
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TTSTT
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   265....270.........280.........290.........300.........310.........320.........330.........340....
 
   323......330.........340.........350.........360..... ....370.
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Query Sequence  . . . . . . . . . . MPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG. . . . . . . . . . . . . . . . . . . . . DYGDTH
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Template Sequence  HPEHHIAKKQMTGFGGAVSFEVDG. . DLLTTAKFVDAL. KIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNL
Template Known Secondary structure  STT
S


SSS..

.SSSSS


SSS

TTS
TTT

SS
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   345....350.........360........ .370.........380 .........390.........400.........410.........420.
 
   372.......380.........390......
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Query Sequence  VRFALIENRDRIRQAIRGIKAMFRA
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Template Sequence  VRFSFGV. . EDFDDLKADILQALDS
Template Known Secondary structure 

S..S
TT
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   422...... .430.........440....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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