Job Description P37765 Confidence 91.04% Date Thu Jan 5 11:57:34 GMT 2012 Rank 46 Aligned Residues 54 % Identity 26% Template c3iz6D_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	R	E	I	E	S	I	I	E	A	G	R	V	S	V	D	G	K	I	A	K	L	G	D	R	V	E	V	T	P	G	L	K	I	R	I	D	G	H	L	I	S	V	R	E	S	A	E	Q	I	C	R	V	L	A	Y	Y	K	P	E	G	E	L	C
Query Conservation
Alig confidence																								.															.	.	.	.	.	.	.	.	.	.
Template Conservation																								.															.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	R	E	V	I	S	I	L	M	Q	R	H	V	L	V	D	G	K	V	R	T	.	D	K	T	Y	P	A	G	F	M	D	V	I	S	I	.	.	.	.	.	.	.	.	.	.	P	K	T	G	E	N	Y	R	L	L	Y	D	T	K	G	R	F	R
Template Known Secondary structure			S	S	S	T						T	T					T	T					.		T	T					T	T						.	.	.	.	.	.	.	.	.	.		S	S										T	T	S
Template Predicted Secondary structure																								.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions