Job Description P37765 Confidence 47.75% Date Thu Jan 5 11:57:34 GMT 2012 Rank 52 Aligned Residues 45 % Identity 20% Template c3h7hA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt4; PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273) Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		114	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		C	G	L	L	L	F	T	T	.	D	G	E	L	A	N	R	L	M	H	P	S	R	E	V	E	R	E	Y	A	V	R	V	F	G	Q	V	D	D	A	K	L	R	D	L	S	R
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		D	G	I	I	A	M	M	S	P	E	D	S	W	V	S	K	W	Q	R	V	S	N	F	K	P	G	V	Y	A	V	S	V	T	G	R	L	P	Q	G	I	V	R	E	L	K	S
Template Known Secondary structure								S		G	G	G							T	T		T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions