Job Description P37765 Confidence 98.91% Date Thu Jan 5 11:57:34 GMT 2012 Rank 21 Aligned Residues 93 % Identity 16% Template c3bbnD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.																																													.	.	.	.	.	.	.	.
Query SS confidence																.																																													.	.	.	.	.	.	.	.
Query Sequence		S	E	K	L	Q	K	V	L	A	R	A	G	H	G	.	S	R	R	E	I	E	S	I	I	E	A	G	R	V	S	V	D	G	K	I	A	K	L	G	D	R	V	E	V	T	P	G	L	K	I	R	I	D	G	H	L	I	S	V	.	.	.	.	.	.	.	.	R	E	S	A	E	Q	I	C	R	V	L	A	Y
Query Conservation																.																																													.	.	.	.	.	.	.	.
Alig confidence																.																										.																			.	.	.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		E	M	R	L	D	N	I	L	F	R	L	G	M	A	P	T	I	P	G	A	R	Q	L	V	N	H	R	H	I	L	V	N	G	R	I	V	D	I	P	S	.	Y	R	C	K	P	Q	D	T	I	M	A	R	D	E	Q	K	S	I	A	L	I	Q	N	S	L	D	L	S	P	R	E	E	L	P	K	H	L	T	L
Template Known Secondary structure			S	B	T	T	T	T	T	T	T	T	T	S	S	S	S	S									T	T					T	T						T	T	.		B			T	T							S	S	T	T	S								S	S	S	T	T	T	S				T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		73			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		Y	.	.	K	P	E	G	E	L	C	T	R	N	D	P	E	G	R	P	T	V	F	D	R	L
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		N	P	F	P	Y	K	G	L	V	N	Q	I	I	D	S	K	W	V	G	L	K	I	N	E	L
Template Known Secondary structure			T	T	T	T						S				G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions