Job Description P37765 Confidence 98.82% Date Thu Jan 5 11:57:34 GMT 2012 Rank 24 Aligned Residues 143 % Identity 23% Template c2ey4A_ PDB info PDB header:isomerase/biosynthetic protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of a cbf5-nop10-gar1 complex Resolution 2.11 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																										.	.																						.
Query SS confidence																																																										.	.																						.
Query Sequence		V	L	A	Y	Y	K	P	E	G	E	L	C	T	R	N	D	P	E	G	R	P	T	V	F	D	R	L	P	K	L	R	G	A	R	W	I	A	V	G	R	L	D	V	N	T	C	G	L	L	L	F	T	T	D	G	E	.	.	L	A	N	R	L	M	H	P	S	R	E	V	E	R	E	Y	A	V	R	V	F	.
Query Conservation																																																										.	.																						.
Alig confidence														.	.	.	.	.	.	.																																						.	.						.	.	.	.													.
Template Conservation														.	.	.	.	.	.	.																																													.	.	.	.
Template Sequence		V	I	N	L	D	K	P	P	G	P	T	S	.	.	.	.	.	.	.	H	E	V	V	A	W	I	K	K	I	L	N	L	E	K	A	G	H	G	G	T	L	D	P	K	V	S	G	V	L	P	V	A	L	E	K	A	T	R	V	V	Q	A	L	.	.	.	.	L	P	A	G	K	E	Y	V	A	L	M	H	L
Template Known Secondary structure									S	S	S			.	.	.	.	.	.	.											T	T		S					S	S				T	T										G	G	G	G	G	G					.	.	.	.	T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																													.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.
			146	.	.	.	150	.	.	.	.	.															.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Query SS confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Query Sequence		.	G	Q	V	D	D	A	K	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	R	G	V	Q	L	E	D	G	P	A	A	F	K	T	I	K	F	S	G	G	E	G	I	N	Q	W	Y	N	V	T	L	T	E	G	R	N	R	E	V	R	R	L	W	E	A	V	G	V	Q	.	.	.	.
Query Conservation		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.												.	.	.	.
Template Conservation																																																																	.	.
Template Sequence		H	G	D	V	P	E	D	K	I	I	Q	V	M	K	E	F	E	G	E	I	I	Q	R	P	P	L	R	S	A	V	K	R	R	L	R	T	R	K	V	Y	Y	I	E	V	L	E	I	E	G	R	D	V	L	F	R	V	G	V	E	A	G	T	Y	.	.	I	R	S	L	I	H	H	I	G	L	A	L	G	V	G
Template Known Secondary structure		S	S													T	T	S									S	S	S		S																			T	T										T	T			.	.												T	S	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
				207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	S	R	L	I	R	V	R	Y	G	D	I	P	L	P	K	G	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	H	M	S	E	L	R	R	T	R	S	G	P	F	K	E	D	E	T	L
Template Known Secondary structure													T	T			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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