Job Description P37765 Confidence 40.25% Date Thu Jan 5 11:57:34 GMT 2012 Rank 54 Aligned Residues 70 % Identity 20% Template c2exuA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription initiation protein spt4/spt5; PDBTitle: crystal structure of saccharomyces cerevisiae transcription elongation2 factors spt4-spt5ngn domain Resolution 2.23 Å

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		114	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		C	G	L	L	L	F	T	T	.	D	G	E	L	A	N	R	L	M	H	P	S	R	E	V	E	R	E	Y	A	V	R	V	F	G	Q	V	D	D	A	K	L	R	D	L	S	R	G	V	Q	L	E	D	G	P	A	A	F	K	T	I	K	F	S	G	G	E	G	I	N	Q	W	Y	N	V	T	L	T	E	G	R
Query Conservation										.
Alig confidence										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	L	V	G	M	C	K	P	T	K	S	W	V	A	K	W	L	S	V	D	H	S	I	A	G	M	Y	A	I	K	V	D	G	R	L	P	A	E	V	V	E	L	L	P	H	Y	K	P	R	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	S	A	T	I	W	G	V	R	C	R	P	G	K
Template Known Secondary structure								S		T	T	T							T	T		T	T	S		S									S								T	T		T	T				T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.		S											T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.														.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		193	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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