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Job DescriptionP37765
Confidence96.71%DateThu Jan 5 11:57:34 GMT 2012
Rank38Aligned Residues134
% Identity22%Templatec1ze2B_
PDB info PDB header:lyase/rnaChain: B: PDB Molecule:trna pseudouridine synthase b; PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100. ........110.........120.........130.........140.......
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Query Sequence  VLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGA. RWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQ
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Template Sequence  ILVAYKPKGPTSH. . . . . . . . DVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQ. . GTRILEFYKDLKKVYGEYDQVP
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   5....10....... ..20.........30.........40.........50.. .......60.........70....
 
   148. 150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  VD. . . . . . . . DAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIP
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Template Sequence  PAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIRVEVSPGTYIRV. . . . . . . . . . . . . . . . . . . . . . . . . RESVGPHT
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   115....120.........130.........140.........150.........160. ........
 
   220.........230.........240
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Query Sequence  LPKGLPRGGWTELDLAQTNYL
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Template Sequence  IEESLNVFE. . . AAPEEIENR
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   201........ 210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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