Job Description P37765 Confidence 100.00% Date Thu Jan 5 11:57:34 GMT 2012 Rank 3 Aligned Residues 226 % Identity 30% Template c1kskA_ PDB info PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: structure of rsua Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		K	L	Q	K	V	L	A	R	A	G	H	G	S	R	R	E	I	E	S	I	I	E	A	G	R	V	S	V	D	G	K	I	A	K	.	L	G	D	R	V	E	V	T	P	G	L	K	I	R	I	D	G	H	L	I	S	V	R	E	S	A	E	Q	I	C	R	V	L	A	Y	Y	K	P	E	G	E	L	C	T	R
Query Conservation																																				.
Alig confidence																																				.										.	.											.	.	.	.
Template Conservation																																														.	.											.	.	.	.
Template Sequence		R	L	D	K	F	I	A	Q	Q	L	G	V	S	R	A	I	A	G	R	E	I	R	G	N	R	V	T	V	D	G	E	I	V	R	N	A	A	F	K	L	L	P	E	H	.	.	D	V	A	Y	D	G	N	P	L	A	.	.	.	.	Q	Q	H	G	P	R	Y	F	X	L	N	K	P	Q	G	Y	V	C	S	T
Template Known Secondary structure												T												T	T					T	T						T	T					T	T		.	.					T	T					.	.	.	.														T	T		B	S	S	S
Template Predicted Secondary structure																																														.	.											.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	P	E	G	R	P	T	V	F	D	R	L	P	K	L	R	G	A	R	W	I	A	V	G	R	L	D	V	N	T	C	G	L	L	L	F	T	T	D	G	E	L	A	N	R	L	M	H	P	S	R	E	V	E	R	E	Y	A	V	R	V	F	G	Q	V	D	D	A	K	L	R	D	L	S	R	G	V	Q	L
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		D	D	P	D	.	H	P	T	V	L	Y	F	L	D	E	P	V	A	W	K	L	H	A	A	G	R	L	D	I	D	T	T	G	L	V	L	X	T	D	D	G	Q	W	S	H	R	I	T	S	P	R	H	H	C	E	K	T	Y	L	V	T	L	E	S	P	V	A	D	D	T	A	E	Q	F	A	K	G	V	Q	L
Template Known Secondary structure		S		S	S	.	S		B	G	G	G	G				T	T	G	G	G				S	S				T	T									S											T	T	S											S	S				T	T
Template Predicted Secondary structure						.
Template SS confidence
		76	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		163	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		E	D	G	.	.	P	A	A	F	K	T	I	K	F	S	G	G	E	G	I	N	Q	W	Y	N	V	T	L	T	E	G	R	N	R	E	V	R	R	L	W	E	A	V	G	V	Q	V	S	R	L	I	R	V	R	Y	G	D	I	P	L	P	K	G	L	P	R	G	G	W	T	E	L	D	L	A	Q	T	N	Y	L
Query Conservation					.	.
Alig confidence					.	.													.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		H	N	E	K	D	L	T	K	P	A	V	L	E	V	I	T	P	.	.	.	.	T	Q	V	R	L	T	I	S	E	G	R	Y	H	Q	V	K	R	X	F	A	A	V	G	N	H	V	V	E	L	H	R	E	R	I	G	G	I	T	L	D	A	D	L	A	P	G	E	Y	R	P	L	T	E	E	E	I	A	S	V
Template Known Secondary structure		T	T		S	S												T	.	.	.	.	T							S				T	T									T	T												T	T					T	T			T	T											T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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