Job Description P37765 Confidence 9.03% Date Thu Jan 5 11:57:34 GMT 2012 Rank 82 Aligned Residues 86 % Identity 17% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																																																							.	.
Query SS confidence																									.																																																							.	.
Query Sequence		A	G	H	G	S	R	R	E	I	E	S	I	I	E	A	G	R	V	S	V	D	G	K	.	I	A	K	L	G	D	R	V	E	V	T	P	G	L	K	I	R	I	D	G	H	L	I	S	V	R	E	S	A	E	Q	I	C	R	V	L	A	Y	Y	K	P	E	G	E	L	C	T	R	N	D	P	E	G	R	.	.
Query Conservation																									.																																																							.	.
Alig confidence																			.	.					.																								.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																			.	.																													.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	.	.	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	Y	H	G	Y	I	Y	.	.	.	.	.	.	.	.	.	.	T	Y	R	V	S	Q	T	E	T	G	S	W	S	A	E	T	A	P	G	V	H	K	R
Template Known Secondary structure				S															.	.		T	T								S	S	S	T	T								S	S	S				.	.	.	.	.	.	.	.	.	.								T	T	S							S	T	T	S
Template Predicted Secondary structure																			.	.																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
				89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	T	V	F	D	R	L	P	K	L	R	G	A	R	W	I	A	V	G	R	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Y	F	R	K	I	K	N	L	I	S	A	F	Q	K	P	D	Q	G	I	V	I	P	L
Template Known Secondary structure				S	S								T	T	S	S		S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions