Job Description P0AAN9 Confidence 6.22% Date Thu Jan 5 11:13:24 GMT 2012 Rank 11 Aligned Residues 74 % Identity 19% Template c3cqcB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:nuclear pore complex protein nup133; PDBTitle: nucleoporin nup107/nup133 interaction complex Resolution 2.53 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	E	L	L	F	K	L	A	Q	K	E	E	E	S	K	E	L	C	A	Q	V	E	A	L	E	I	I	V	T	A	M	L	R	N	.	M	A	Q	N	D	Q	Q	R	L	I	D	Q	V	E	G	A	L	Y	E	V	K	P	D	A	S	I	P	D	D	D	T	E	L	L	R	D	Y	V	K	K	L	L	K	H	P
Query Conservation																																				.
Alig confidence																.	.																			.																														.	.	.
Template Conservation																.	.																																																	.	.	.
Template Sequence		H	A	T	L	L	G	L	A	N	M	E	T	R	Y	.	.	F	A	K	K	K	T	L	L	G	L	S	K	L	A	A	L	A	S	D	F	S	E	D	M	L	Q	E	K	I	E	E	M	A	E	Q	E	R	F	L	L	H	Q	E	T	L	P	E	Q	.	.	.	L	L	A	E	K	Q	L	N	L	S	A	M	P
Template Known Secondary structure														S		.	.																		S																										T			T	T	.	.	.					T	T			S	S	S	S
Template Predicted Secondary structure																.	.																																																	.	.	.
Template SS confidence
		950	.	.	.	.	.	.	.	.	.	960	.	.	.			.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.				.	.	.	.	.	.	.	.	1020	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions