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Job DescriptionP42592
Confidence98.58%DateThu Jan 5 12:01:39 GMT 2012
Rank24Aligned Residues315
% Identity19%Templated2p0va1
SCOP infoalpha/alpha toroid Six-hairpin glycosidases CPF0428-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TWPWDTWKQAF. . . AMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSL. .
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Template Sequence  XWLRDSGAQVWPYVQLANKDPELK. KXLAGVINRQ. . . . . . . . . . . . FKCINIDPYANAFNXNSEGGEWXSDLTDXKPEL
Template Known Secondary structure  SGGGGGGGGG
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GGGGSSS


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   106...110.........120......... 130......... 140.........150.........160.........170..
 
   418.420.........430...... ...440.........450.......
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Query Sequence  . . . . . . . . . . . . AAWSVMEVYNVTQDKTWVA. EMYPKLVAYHDWWLRNRDHNG. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  HERKWEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTXTNDGWGNPV
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TTSSTT
SS
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S
GGGS
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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   458.460.........470.........480.........490.........500.........510.........520.........530.....
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Query Sequence  . . NGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKE
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Template Sequence  KPVGLIASAFRPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DDATTFQFL. . .
Template Known Secondary structure 

SS



SB
TT.......................................................S
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   253......260..... ....270....
 
   536...540.........550.........560.........570.........580.........590.... .....600.........610....
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Query Sequence  QLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATIL. GKPEEAKRYRQLAQQLADYI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKAL
Template Known Secondary structure  ......................................TS

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   275....280.........290.........300.........310......
 
   615.... 620.........630.........640.........650.........660.........670.........680.........690..
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Query Sequence  NTCMF. . DPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAAL
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Template Sequence  KKYAVCNHPKYGKIYAFEVDGFGNQLLXDDANVPSLIA. . . . . LPYLGDVKVTDPIYQNTRKFV. . . . . WSE. DNPYFFK
Template Known Secondary structure  STTT
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SSSS
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   317..320.........330.........340.........350.... .....360.........370..... ... .380.....
 
   693......700.........710.........720.........730.........740.........750.........760.........770..
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Query Sequence  TNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHL
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Template Sequence  GSAGEGIGGPHIGYDXIWPXSIXXKAFT. SQNDAEIKTCIKXLXDT. . . DAGTGFXHESFNKNDPKNFTRAWFAWQNTLF
Template Known Secondary structure 
SS


TTT
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T...STTS
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   386...390.........400.........410... ......420.........430 .........440.........450.........460.
 
   773......780.
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Query Sequence  YMLYNDFFR
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Template Sequence  GELILKLVN
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   462.......470
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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