Job Description P42592 Confidence 95.13% Date Thu Jan 5 12:01:39 GMT 2012 Rank 28 Aligned Residues 310 % Identity 15% Template d2afaa1 SCOP info alpha/alpha toroid Six-hairpin glycosidases N-acylglucosamine (NAG) epimerase Resolution 2.15

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.								.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		P	E	Q	T	R	V	A	V	K	A	I	E	T	L	N	G	N	W	R	S	P	G	G	A	V	K	F	N	T	V	T	P	S	V	T	G	R	W	F	S	G	N	Q	T	W	P	W	D	T	W	K	Q	A	F	A	M	A	H	F	.	.	.	.	.	.	.	N	P	D	I	A	K	E	N	I	R	A	V	F	S
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence																																			.	.	.		.																						.	.	.	.	.	.	.
Template Conservation																																			.	.	.		.
Template Sequence		P	G	A	Y	D	L	V	D	H	G	I	K	A	X	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	Q	.	.	.	G	.	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	V	I	E	K
Template Known Secondary structure		T	T												T	T	T	T	T	B		T	T	T	S	S	B		S				S	S	.	.	.	S	.																							T	T	T		T	T
Template Predicted Secondary structure																																			.	.	.		.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		W	Q	I	Q	P	G	D	S	V	R	P	Q	D	V	G	F	V	P	D	L	I	A	W	N	L	S	P	E	R	G	G	D	G	G	N	W	N	E	R	N	T	K	P	S	L	A	A	W	S	V	M	.	E	V	Y	N	V	T	Q	D	K	T	W	V	A	E	M	Y	P	K	L	V	A	Y	H	D	W	W	L	R
Query Conservation																																																					.
Alig confidence							.	.	.	.	.	.																		.	.	.	.	.	.	.	.																.
Template Conservation							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		Y	F	W	S	E	.	.	.	.	.	.	E	E	Q	X	C	L	E	S	W	D	E	A	F	S	Q	T	E	.	.	.	.	.	.	.	.	D	Y	R	G	G	N	A	N	X	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	L	R	I	A	S	V	I	I	H	D	V	A	R
Template Known Secondary structure			T			T	.	.	.	.	.	.	T	T	T								T	T	S			B		.	.	.	.	.	.	.	.	S																				T	T			T																			G
Template Predicted Secondary structure							.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		452	.									.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.
Query Sequence		N	R	.	.	.	.	.	.	.	.	D	H	N	G	N	G	V	P	E	Y	G	A	T	R	D	K	A	H	N	T	E	S	G	E	M	L	F	T	V	K	K	G	D	K	E	E	T	Q	S	G	L	N	N	Y	A	R	V	V	E	K	G	Q	Y	D	S	L	E	I	P	A	Q	V	A	A	S	W	E	S	G	R
Query Conservation				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	D	Y	R	V	N	E	H	F	D	S	Q	W	N	P	I	R	D	Y	N	K	D	N	P	A	H	R	F	R	A	Y	G	G	T	P	G	H	W	I	E	W	G	R	L	X	L	H	L	H	A	A	L	E	A	R	F	E	T	P	P	A	W	L	L	E	D	A	K	G	L	F	H	A	T	I	R	D	A	W
Template Known Secondary structure		G	G	T	T								T	T			B		T	T	T	T	T	T		T	T			T	T		S	S	B																					T	T	T																							B
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.				590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																													.	.	.
Query SS confidence																																								.																													.	.	.
Query Sequence		D	D	A	A	V	F	G	F	I	D	K	E	Q	L	D	K	Y	V	A	N	G	G	K	R	S	D	W	T	V	K	F	A	E	N	R	S	Q	D	.	G	T	L	L	G	Y	S	L	L	Q	E	S	V	D	Q	A	S	Y	M	Y	S	D	N	H	Y	L	A	E	.	.	.	M	A	T	I	L	G	K	P	E	E
Query Conservation																																								.																													.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.																													.	.	.										.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	G	A	D	G	F	V	Y	S	V	D	W	D	G	K	P	I	V	R	E	R	V	R	W	P	I	V	E	A	X	G	T	A	Y	A	L	Y	T	L	T	D	D	S	Q	.
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S	S	B		S		B		T	T	S		B	S	S																											.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template SS confidence
		293																																		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.								.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.
Query Sequence		A	K	R	Y	R	Q	L	A	Q	Q	L	A	D	Y	I	N	T	C	M	F	D	P	T	T	Q	F	Y	Y	D	V	R	I	E	D	K	P	L	A	N	G	C	A	G	.	.	.	.	.	.	.	K	P	I	V	E	R	G	K	G	P	E	G	W	S	P	L	F	N	G	A	A	T
Query Conservation																																													.	.	.	.	.	.	.
Alig confidence		.	.	.																																									.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Y	E	E	W	Y	Q	K	W	W	D	Y	C	I	K	Y	L	X	D	Y	E	N	G	S	W	W	Q	E	L	D	A	D	N	K	V	T	T	G	K	Q	D	I	Y	H	L	L	H	C	L	V	I	P	R	L	P	L	A	P	G	L	A	P	A	V	A	A	G	L	L	D
Template Known Secondary structure		.	.	.																T	B		T	T	T	S	S	B		S				T	T	S		B								T	T	T					T	G	G	G	S		S	S	S								T	T		T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions