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Job DescriptionP42592
Confidence100.00%DateThu Jan 5 12:01:39 GMT 2012
Rank7Aligned Residues401
% Identity16%Templated1v7wa1
SCOP infoalpha/alpha toroid Six-hairpin glycosidases Glycosyltransferase family 36 C-terminal domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  SKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSG
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Template Sequence  GERLREHYQDVANIDAAFAAIKAHWDERCAKF. . QVKSPNQGLDTMI. . . . . NAWTLYQAETCVVWSRFASFIEVGGRTG
Template Known Secondary structure  TTSTT..
S
.....TT
SS
SSS

SS

S
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   273......280.........290.........300.... .....310....... ..320.........330.........340.....
 
   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  NQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
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Template Sequence  . . LGYRDTAQDAISVPHANPEMTRKRIVDLLRGQVKA. . . . . . . . . GYGLHLFDPDWFDPIHGIKDTCS. . . DDHLWLIP
Template Known Secondary structure  ..TTS
TTT
TB
TT.........S
B
S
GGGG




GGG
BS...SGGGG
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   346...350.........360.........370.........380 .........390.........400... ......410.
 
   421........430.........440.........450.. .......460.........470.........480.........490.
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Query Sequence  SVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRN. . . . . . . . . RDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQ
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Template Sequence  TICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKGLRA. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

GGGGG

TTS
SB
TTS
BT
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   434.....440.........450.........460.........470.........480........
 
   492.......500.........510.........520.........530.........540.........550.........560.........570.
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Query Sequence  SGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . DWNDCLNLGGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ..........................SSSTT


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   489490.........
 
   572.......580.........590.........600.........610.........620.........630.........640.........650.
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Query Sequence  ESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKG
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Template Sequence  ESSMVSFLHFWALQEFIDLAKFLGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLTKNGDKIGTAQQQEG. . RVHL
Template Known Secondary structure  T
STTTT


TTS
S
TT
SS
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   500.........510.........520.........530.........540.........550.........560.........570... ....
 
   652.......660.........670.........680.........690...... ...700.........710.........720.
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Query Sequence  PEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPA. . . . . . . . . . FGADIYWRGRVWVDQFWFGLKGMER
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Template Sequence  ESNTLAVLSGLASQERGEQAMDAVD. . EHLFSPYGLHLNAPSFSTPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETK
Template Known Secondary structure  TT
S
..TT
SS


S

TTT
GGGGS
TTBTTBTSSTT
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   578.580.........590.........600.. .......610.........620.........630.........640.........650.....
 
   722.......730....... ..740.........750.........760....... ..770.........780
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Query Sequence  YGYRDDALKLADTFFR. . . . . . HAKGLTADGPIQENYNPLTGAQQGAPNFSW. . . SAAHLYMLYNDFF
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Template Conservation   
    
   
                                        
  


           
Template Sequence  LGRGDRAMKFYDALNPYNQNDIIEKRIAEPYSYVQFIMGRDHQDHGRANHPWLTGTSGWAYFAVTNYI
Template Known Secondary structure  TT

GGGGTT

S
TTS


TTSTTTT
SS
TTT
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   656...660.........670.........680.........690.........700.........710.........720...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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