Job Description P42592 Confidence 54.73% Date Thu Jan 5 12:01:39 GMT 2012 Rank 39 Aligned Residues 299 % Identity 11% Template c3pmmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative cytoplasmic protein; PDBTitle: the crystal structure of a possible member of gh105 family from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578 Resolution 1.90 Å

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		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	W	S	V	M	E	V	Y	N	V	T	Q	D	K	T	W	V	A	E	M	Y	P	K	L	V	A	Y	H	D	W	W	L	R	N	R	D	H	N	G	N	G	V	P	E	Y	G	A	T	R	D	K	A	H	N	T	E	S	G	E	M	L	F	T	V	K	K	G	D	K	E	E	T	Q	S	G	L	N	N
Query Conservation
Alig confidence																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	L	Y	G	I	Y	Q	Y	Y	Q	Q	T	G	D	I	E	X	R	D	I	I	.	.	.	.	D	R	W	F	A	D	R	F	A	E	G	A	T	T	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	R	V	V	E	K	G	Q	Y	D	S	L	E	I	P	A	Q	V	A	A	S	W	E	S	G	R	D	D	A	A	V	F	G	F	I	D	K	E	Q	L	D	K	Y	V	A	N	G	G	K	R	S	D	W	T	V	K	F	A	E	N	R	S	Q	D	G	T	L	L	G	Y	S	L	L	Q	E	S	V	D	Q
Query Conservation
Alig confidence		.	.	.	.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	V	N	T	X	A	P	F	L	T	L	A	Y	R	F	E	E	T	G	R	X	A	Y	L	P	W	L	E	S	W	A	E	W	A	X	H	E	X	P	R	T	E	Q	G	G	X	Q	H	X	T	L	A	E	E	N	H	Q	Q	X	W	D	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	T	T	T	T	T	T														G	G	G														T	S		B		G	G	G		B					S	S				T	T				T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640			.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		A	S	Y	M	Y	S	D	N	H	Y	L	A	E	M	A	T	I	L	G	K	P	E	E	A	K	R	Y	R	Q	L	A	Q	Q	L	A	D	Y	I	N	T	C	M	F	D	P	T	T	Q	F	Y	Y	D	V	R	I	E	D	K	P	L	A	N	G	C	.	.	A	G	K	P	I	V	E	R	G	K	G	P	E	G
Query Conservation																																																																		.	.
Alig confidence		.	.	.																				.	.	.	.																																							.	.
Template Conservation		.	.	.																				.	.	.	.
Template Sequence		.	.	.	L	X	X	T	V	L	P	L	A	K	I	G	K	L	L	N	R	P	Q	.	.	.	.	Y	V	E	E	A	T	Y	Q	F	L	L	H	V	Q	N	L	X	D	R	E	T	G	L	W	F	H	G	W	N	Y	E	G	R	H	N	F	A	R	A	R	W	A	R	G	N	S	W	L	T	X	V	I	P	D
Template Known Secondary structure		.	.	.				T											T	T				.	.	.	.																	B		T	T	T	S		B		S				T	T	T	T	B		T	T				B
Template Predicted Secondary structure		.	.	.																				.	.	.	.
Template SS confidence
					169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	P	L	F	N	G	A	A	T	Q	A	N	A	D	A	V	V	K	V	M	L	D	P	K	E	F	N	T	F	V	P	L	G	T	A	A	L	T	N	P	A	F	G	A	D	I	Y	W	R	G	R	V	W	V	D	Q	F	W	F	G	L	K	G	M	E	R	Y	G	Y	R	D	D	A	L	K	L	A	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	E	L	V	D	L	P	E	G	N	A	V	R	R	Y	L	I	T	V	L	D	A	Q	I	A	A	L	A	E	C	Q	D	D	S	G	L	W	H	T	L	L	D	D	P	H	S	Y	L	E	A	S	A	T	A	G	F	A	Y	G	I	L	K	A	V	R	K	R	Y	V	G	Q	H	Y	A	G	V	A	E	K
Template Known Secondary structure										T	T																								T	T	S				S	B	T	T		T	T	S																				T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.									760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		F	F	R	H	A	K	G	L	T	A	D	G	P	I	Q	E	N	Y	N	P	L	T	G	A	Q	.	.	.	.	.	.	.	.	Q	G	A	P	N	F	S	W	S	A	A	H	L	Y	M	L	Y	N	D	F	F	R	K
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	R	G	I	V	Q	N	I	S	P	Q	G	E	L	L	Q	T	S	F	G	T	G	X	G	S	D	L	D	F	Y	R	Q	I	P	L	T	S	X	P	Y	G	Q	A	X	A	I	L	C	L	T	E	Y	L	R	K
Template Known Secondary structure									T	B		T	T	S		B		S		B							S	S						T			B																			G	G
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions