Job Description P42592 Confidence 70.12% Date Thu Jan 5 12:01:39 GMT 2012 Rank 33 Aligned Residues 160 % Identity 11% Template c3k11A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycosyl hydrolase; PDBTitle: crystal structure of putative glycosyl hydrolase (np_813087.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.				.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		L	A	A	W	S	V	M	E	V	Y	N	V	T	Q	D	K	.	.	.	T	W	V	A	E	M	Y	P	K	L	V	A	Y	H	D	W	W	L	R	N	R	D	H	N	G	N	G	V	P	E	Y	G	A	T	R	D	K	A	H	N	T	E	S	G	E	M	L	F	T	V	K	K	G	D	K	E	E	T	Q	S	G
Query Conservation																		.	.	.
Alig confidence																		.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	Y	S	A	L	I	A	A	A	E	T	T	G	D	K	R	Y	T	D	Y	V	Q	N	R	F	R	F	L	A	E	V	A	P	H	F	K	R	V	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	G	K	T	D	S	Q	L	L	Q	I	L	T	P	H	A	L	D	D	A
Template Known Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S											S			S	G	G	G	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.		.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		L	N	N	Y	A	R	V	V	E	K	G	Q	Y	D	S	L	E	I	P	A	Q	V	A	A	S	W	E	S	G	R	.	D	D	A	A	V	F	G	F	I	D	K	E	Q	L	D	K	Y	V	A	N	G	G	K	R	S	D	W	T	V	K	F	A	E	N	R	S	Q	D	G	T	L	L	G	Y	S	L	L	Q	E
Query Conservation																																.
Alig confidence																																.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	V	C	T	A	X	I	K	L	R	L	K	D	E	S	L	P	V	D	G	L	I	Q	N	Y	F	D	F	I	I	N	K	E	Y	R	L	A	D	G	T	F	A	R	N	R	P	Q	R	N	T	L	W	L	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T																	T	S		B		T	T			B		B		S	S	S	T	T				T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	Q	A	S	Y	M	Y	S	D	N	H	Y	L	A	E	M	A	T	I	L	G	K	P	E	E	A	K	R	Y	R	Q	L	A	Q	Q	L	A	D	Y	I	N	T	C	M	F	D	P	T	T	Q	F	Y	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.																					.	.
Template Conservation		.	.	.	.	.	.	.																					.	.
Template Sequence		.	.	.	.	.	.	.	X	F	X	G	I	P	A	V	A	Q	X	S	R	Y	D	K	E	A	K	N	.	.	K	Y	L	A	E	A	V	K	Q	F	L	Q	F	A	D	R	X	F	I	P	E	K	G	L	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.																G	G	G			.	.																				T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																					.	.
Template SS confidence
									224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions