Return to main results Retrieve Phyre Job Id

Job DescriptionP42592
Confidence100.00%DateThu Jan 5 12:01:39 GMT 2012
Rank1Aligned Residues758
% Identity100%Templatec3c67B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:uncharacterized protein ygjk; PDBTitle: escherichia coli k12 ygjk in a complexed with glucose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 



























































Query SS confidence 















































































Query Sequence  ADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGK
Query Conservation       
 

    
                  
 


 
  

      
 
 

     
                   
Alig confidence 















































































Template Conservation       
 

    
                  
 


 
  

        
 

     
                   
Template Sequence  ADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGK
Template Known Secondary structure 
TT
TTSS

B




TTSSBSS

B

TT
SB
B

STTTTTS



SSSTT
Template Predicted Secondary structure 






























































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  KVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYP
Query Conservation             

 
 
                      
     
     
                            
Alig confidence 















































































Template Conservation             

 
 
                            
       
 
                 
      
Template Sequence  KVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYP
Template Known Secondary structure 


TT
SSTTSS


TTS
S
B
T
Template Predicted Secondary structure 

































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   185....190.........200.........210.........220.........230.........240.........250.........260....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  DYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQ
Query Conservation                  
                     
                            
            
Alig confidence 















































































Template Conservation                                                                     
            
Template Sequence  DYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQ
Template Known Secondary structure  TT

TT



TTT

S

SS

TTSSS
S
Template Predicted Secondary structure 






































Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  MQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTW
Query Conservation                     
                     
 
    
        
   
    
     

     
Alig confidence 















































































Template Conservation                     
                     



   
  

 
  
        
     

     
Template Sequence  MQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTW
Template Known Secondary structure 



TTS
T

BTTB
S

S
TT
TTT
TT
B
Template Predicted Secondary structure 






























Template SS confidence 















































































   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   345....350.........360.........370.........380.........390.........400.........410.........420....
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  PWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAWSVME
Query Conservation   


 
 




  

  
  

  
   
    
     
 
 


 
              
    




 



  
Alig confidence 















































































Template Conservation   


 
 




  

  
  

  

  
    
     
 
 


 
              
    




 



  
Template Sequence  PWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAWSVME
Template Known Secondary structure  TTT
TT


TT
SS
GGGTT


SBB
SS

GGGTS

SS
B
S





Template Predicted Secondary structure 








































Template SS confidence 















































































   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   425....430.........440.........450.........460.........470.........480.........490.........500....
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  VYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKG
Query Conservation 

  
 
 









     

   

 

 

 


                  
                 
   
Alig confidence 















































































Template Conservation 

  
 
 


  




   
 

   

 
  

 


  
   
    
                            
Template Sequence  VYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKG
Template Known Secondary structure 

S
TT
SS





TTTB
TT

BTT

Template Predicted Secondary structure 
















































Template SS confidence 















































































   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   505....510.........520.........530.........540.........550.........560.........570.........580....
Predicted Secondary structure 

























































Query SS confidence 















































































Query Sequence  QYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDN
Query Conservation             
  



 


 


                  
         
              




 
    
Alig confidence 















































































Template Conservation        
    
   


 


 

                   
            
           




 
    
Template Sequence  QYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDN
Template Known Secondary structure 
SS
T
TT
GGGT


TT

GGGG



TT

S
Template Predicted Secondary structure 

























































Template SS confidence 















































































   482.......490.........500.........510.........520.........530.........540.........550.........560.
 
   585....590.........600.........610.........620.........630.........640.........650.........660....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  HYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAAT
Query Conservation    

 

  

    
      
  
  

   




 
 
 
  
                         

  

  
Alig confidence 















































































Template Conservation    

 

  

    
      
  
  

   




 
 
 
  
                       
 

  

  
Template Sequence  HYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAAT
Template Known Secondary structure  TT
STTTT



SS

TTS
SS
B
GGG


GGGGTT
S
Template Predicted Secondary structure 




































Template SS confidence 















































































   562.......570.........580.........590.........600.........610.........620.........630.........640.
 
   665....670.........680.........690.........700.........710.........720.........730.........740....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  QANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTA
Query Conservation   
 
  

  
 
   
 
  

 


  

 
 
  






 
 
 
 
 

 


  
 
  

  
      
  
Alig confidence 















































































Template Conservation     
  

  
     
 
  





  

 
    






 
 
 


 

 


  
 
  

  
         
Template Sequence  QANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTA
Template Known Secondary structure  T
TTTT

SS
S
SS
TT
TT

TT
TTTT
TT
STTTTS
Template Predicted Secondary structure 






























Template SS confidence 















































































   642.......650.........660.........670.........680.........690.........700.........710.........720.
 
   745....750.........760.........770.........780..
Predicted Secondary structure 


















Query SS confidence 





































Query Sequence  DGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRK
Query Conservation   
   
 


 

 
 
   






 
 

  
 
 
Alig confidence 





































Template Conservation   
   
 


 


  
   






 
 

 


 
Template Sequence  DGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRK
Template Known Secondary structure  SS


S
TTT

S
TT
T


Template Predicted Secondary structure 


















Template SS confidence 





































   722.......730.........740.........750.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions