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Job DescriptionP42592
Confidence100.00%DateThu Jan 5 12:01:39 GMT 2012
Rank4Aligned Residues382
% Identity24%Templatec2z07A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative uncharacterized protein ttha0978; PDBTitle: crystal structure of uncharacterized conserved protein from2 thermus thermophilus hb8
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   305....310.........320.........330.........340.........350.........360.........370.........380....
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Query Sequence  VAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQ
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Template Sequence  LRTKAVEVLQRNSRG. . . . . . . AFTVPA. . . HGLY. PYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQGP. . . . . . .
Template Known Secondary structure  B
S.......S
B
SS...TT

.S
TTT


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   4.....10........ .20.... .... .30.........40.........50.........60.....
 
   385....390.........400.........410.........420.........430... ......440.........450.........460
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Query Sequence  DVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKT. . . . WVAEMYPKLVAYHDWWLRNRDHNGNGV
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Template Sequence  . DGXLPHIVFHEQSRDYFAQP. . ATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGL
Template Known Secondary structure  .T



S

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S

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   66...70.........80..... ....90.........100.........110.........120.........130.........140..
 
   461........470.........480.........490.........500.........510.........520.........530.........540
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Query Sequence  PEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
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Template Sequence  VVI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VHPWESGXDNSPAWDKPLSRVPVKH
Template Known Secondary structure 

B....................................................SSGGGGT
TT
GGGT




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   154.. ...160.........170.........180.
 
   541........550..... ....560.........570.........580.........590.........600.........610........
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Query Sequence  VANGGKRSDWTVKFA. . ENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCM
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Template Sequence  VNPDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQEDPY. . . EIEEWIVRGEVGLEAL
Template Known Secondary structure  S


TTT

S


TT


...T
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   193......200.........210.........220.........230.........240.........250... ......260.........
 
   619620.........630.........640.........650.........660.........670.........680.........690........
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Query Sequence  FDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFG
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Template Sequence  WDREAGFYFSWDLVAGEPI. . . . . . . . . . AVKTSAGFLPLFAGTPHQGRASLLAQEA. ERWGEKARYLLPSVDPTSPFFE
Template Known Secondary structure  TTTT

TTTT
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BGGGGTT
S
.TTT
SSS
BSB
TTSTT

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   277..280.........290..... ....300.........310.........320... ......330.........340.....
 
   699700.........710.........720.........730.........740.........750.........760.........770.......
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Query Sequence  ADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYN
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Template Sequence  PGRYWRGPVWINVNWXVAEGFRDYGFAALAARLKADALA. . . . LXEREGFREYYDPLTGQGRGGEGFSWSAALALFWTR
Template Known Secondary structure  TTSTTSS
B
TT
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TTT

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   346...350.........360.........370.........380.... .....390.........400.........410.........420
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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