Job Description P42592 Confidence 6.48% Date Thu Jan 5 12:01:39 GMT 2012 Rank 93 Aligned Residues 86 % Identity 17% Template c2bldD_ PDB info PDB header:virus Chain: D: PDB Molecule:penton protein; PDBTitle: the quasi-atomic model of human adenovirus type 52 capsid (part 1) Resolution 10.00 Å

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		121	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	L	T	A	K	D	.	.	.	V	Q	V	E	M	T	L	R	F	A	T	P	R	T	S	L	L	E	T	K	I	T	S	N	K	P	L	D	L	V	W	D	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	K	L	E	A	K	E	G	K	P	L	S	D	K	T	I
Query Conservation									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	T	I	N	L	D	D	R	S	H	W	G	G	D	L	K	T	I	L	H	T	N	M	P	N	V	N	E	F	M	F	T	N	K	F	K	A	R	V	M	V	S	R	S	L	T	K	D	K	Q	V	E	L	K	Y	E	W	V	E	F	T	L	P	E	G	N	Y	S	E	T	M	T	I	D	L	M	N	N	A	I
Template Known Secondary structure								T	T																	S	B		T	T	T	T		S														T	T	T															T	B			S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	Y	P	D	Y	Q	R	K	I	S	A	T	R	D	G	L	K	V	T	F	G	K	V	R	A	T
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		V	E	H	Y	L	K	V	G	R	Q	N	G	V	L	E	S	D	I	G	V	K	F	D	.	T	R	N	F
Template Known Secondary structure						T	T	T	T	G	G	G	S			S	T	T							.				T
Template Predicted Secondary structure																									.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions