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Job DescriptionP42592
Confidence98.23%DateThu Jan 5 12:01:39 GMT 2012
Rank25Aligned Residues427
% Identity15%Templatec1h54B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:maltose phosphorylase; PDBTitle: maltose phosphorylase from lactobacillus brevis
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90.........100.........110.........120.........130.....
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Query Sequence  WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLR. . . . .
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Template Sequence  LGGVWYPDKTRVGWWKNGYPKYFGKVVN. . AVNFIKLPIEINGEPVDLAKDKISDF. . . TLDLDMHQGVLNRSFVVERGA
Template Known Secondary structure 


SS

TT

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B




TT

TTTS...TTTTTT
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   56...60.........70.........80... ......90.........100......... 110.........120.........130
 
   136.. .140 .........150.........160.........170.........180.........190.........200...
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Query Sequence  . . . . . . . . . FAT. . PR. TSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGK
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Template Sequence  VRVALNFQRFLSVAQPELSVQKVTVKNLSDAEVDVTLKPSIDADVMNEEANYDERF. . . . . . . . . . . . . . WDVLATDQQA
Template Known Secondary structure 
SSSTT
SSS







TT
TTS


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S
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   131........140.........150.........160.........170.........180...... ...190......
 
   204.....210.........220.........230.........240.........250........ .260
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Query Sequence  VRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQ. . . . . . . . . . . . . . . . . . . . . . . EV
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Template Sequence  DRGSIVAKTTPNPFGTPRFTSGMEMRLVTDLKNVAITQPNEKEVTTAYTGKLAPQASAELEKRVIVVTSRDYDTQESLTA
Template Known Secondary structure  S


SS




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BTT

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   197..200.........210.........220.........230.........240.........250.........260.........270......
 
   261........270.........280.........290.........300.........310.........320...... ...330........
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Query Sequence  SKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKF. . NTVTPSVTGRWF
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Template Sequence  AMHQLSDKVAQSSYEDLLNAHTAIWAQRWEKSDVVIKGDDESQQGIRFNLFQLFSTYYGEDARLNIGPKGFTGE. . . KYG
Template Known Secondary structure  TTS


S


SS
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TTTTS
S...TTT
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   277..280.........290.........300.........310.........320.........330.........340.........350 ...
 
   339340.........350.... .....360.........370.........380.........390.........400.........410......
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Query Sequence  SGNQTWPWDTWKQAFA. . MAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPS
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Template Sequence  GA. . . TYWDTEAFAFPVYLGITDPKVTRNLLMYRYK. . QLDGAYINAQEQGL. KGALFPMVTFDGIECHNEWEITFEEIH
Template Known Secondary structure  T
...B
TS
T..TTT
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SSBSSSS




TT
T
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   354. ....360.........370.........380...... ...390.........400 .........410.........420.......
 
   417. .420.........430........ .440.........450... ......460.........470.........480.........490
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Query Sequence  LA. . . AWSVMEVYNVTQDKTWVAEM. YPKLVAYHDWWLRNR. . DHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEET
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Template Sequence  RNGDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYENNVDNNWDT. . . . . . . . .
Template Known Secondary structure 


TTTTT
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SB

S
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   428.430.........440.........450.........460.........470.........480.........490........
 
   491........500.........510.........520.........530.........540.........550.........560.........570
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Query Sequence  QSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLL
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   571........580......... 590..... ....600.........610
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Query Sequence  QESVDQASYMYSDNHYLAE. . . . . . . . MATILG. KPEEAKRYRQLAQQL
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Template Sequence  . . . . . . NMLAQWTLKYTLEILGKVDQDTAKQLDVSDEEKTKWQDIVDRM
Template Known Secondary structure  ......TTS
T

TB
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   499500.........510.........520.........530.........540.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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