|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | H | L | M | R | S | R | Y | C | A | F | V | M | Q | D | A | D | Y | L | I | K | T | W | H | P | S | C | G | . |
. |
. |
. |
. |
. |
. |
. |
A | A | A | L | R | A | E | L | M | A | G | F | A | H | . |
. |
. |
T | E | W | L | G | L | T | V | F | E | H | C | W | Q | D | A | D | N | I | G | F | V | S | F | V | A |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . |   |   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
P | E | X | I | I | S | L | E | K | E | A | L | A | S | T | D | P | X | A | F | V | E | L | S | D | T | D | V | I | Y | F | D | P | S | L | E | T | K | I | E | G | L | E | Q | L | R | T | Y | Y | K | G | X | Q | L | P | P | A | D | H | F | D | X | I | R | P | V | V | Q | V | A | Q | N | I | A | V | L | T | F | N | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| S | S |
|  |  | S |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
R | F | T | E | G | G | K | T | G | A | I | I | E | R | S | R | F | L | K | E | . |
N | G | Q | W | Y | Y | I |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   | . |
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|
Template Sequence |   |
D | S | Y | L | S | D | K | V | I | K | W | N | C | T | E | V | Y | R | R | N | P | D | N | Q | W | K | I | I |
Template Known Secondary structure |   |
 |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | B |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
  |