|   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Y | S | M | P | V | P | M | M | N | I | I | N | G | G | E | H | A | D | N | N | V | D | I | Q | E | F | M | I | Q | P | V | G | A | K | T | V | K | E | A | I | R | M | G | S | E | V | F | H | H | L | A | K | V | L | K | A | K | G | M | N | T | A | V | G | D | E | G | G | Y | A | P | N | L | G | S | N | A | E | A |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |   | . | . |   |   |   |   |
|   |   |   |
Template Sequence |   |
R | V | R | D | S | L | E | V | A | W | T | L | A | S | G | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A | R | D | I | A | E | A | R | H | M | L | E | I | R | R | H | R | V | F | K | L | K | I | G | A | N | . |
. |
P | V | E | Q | D | L | K | H |
Template Known Secondary structure |   |
|
|
| S |  |  |  | B |
|  |  |  |
|
| S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |  |
| S | S | S | . | . |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
. | . | . | . | . | . | 180 | . |
  |
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | V | I | A | E | A | V | K | A | A | G | Y | E | L | G | K | D | I | T | L | A | M | D | C | A | A | S | E | F | Y | K | D | G | K | Y | V | L | A | G | E | G | N | K | A | F | T | S | E | E | F | T | H | F | L | E | E | L | T | K | Q | Y | P | I | V | S | I | E | D | G | L | D | E | S | D | W | D | G | F | A |
Query Conservation |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   | . | . | . | . | . | . | . |
|   |   |   |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
| . |   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
V | V | T | I | K | R | E | L | . |
. |
. |
. |
. |
. |
. |
G | D | S | A | S | V | R | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | N | Q | Y | W | D | E | S | Q | A | I | R | A | C | Q | V | L | . |
G | D | N | G | I | D | L | I | E | Q | P | I | S | R | I | N | R | G | G | Q | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . | . | . | . | G | G | G | S |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T |
| B |
|  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T |
|
|
|  |  |
|
| B |
| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
182 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
  |   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | Q | T | K | V | L | G | D | K | I | Q | L | V | G | D | D | L | F | V | T | N | T | K | I | L | K | E | G | I | E | K | G | I | A | N | S | I | L | I | K | F | N | Q | I | G | S | L | T | E | T | L | A | A | I | K | M | A | K | D | A | G | Y | T | A | V | I | S | H | R | S | G | E | T | E | D | A | T | I | A | D |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|
|
|
|   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|
|
|
|   | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
R | L | N | Q | R | T | P | A | P | I | M | A | . |
. |
. |
D | E | S | I | E | S | V | E | D | A | F | S | L | A | A | D | G | A | A | S | I | F | A | L | K | I | A | K | N | G | G | P | R | A | V | L | R | T | A | Q | I | A | E | A | A | G | I | G | L | Y | G | G | T | . |
M | L | E | G | S | I | G | T | L | A | S |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |
|  |  |  | . | . | . | S | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |
|  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|
| . | S | S |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | |
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
. | . | . | . | . | . | . | . | 310 | . | . |
  |
  |   |
383 | . | . | . | . | . | . | 390 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | V | G | T | A | A | G | Q | I |
Query Conservation |   |
|
|
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |   |   |
Template Sequence |   |
A | H | A | F | L | T | L | R | Q | L |
Template Known Secondary structure |   |
 |  |  |  | T | T |
| S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
313 | . | . | . | . | . | . | 320 | . | . |
  |