|   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | V | G | A | K | T | V | K | E | A | I | R | M | G | S | E | . |
V | F | H | H | L | A | K | V | L | K | A | K | G | M | N | T | A | V | G | D | E | G | G | Y | A | P | N | L | G | S | N | A | E | A | L | A | V | I | A | E | A | V | K | A | A | G | Y | E | L | G | K | D | I | T | L | A | M | D | C | A | A | S |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   | . |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |   |
|   |
|
|
|
|   |   | . | . | . | . | . | . | . | . |
|
|   |   |
|   |
|
| . | . | . | . |
Template Sequence |   |
A | L | T | P | E | S | V | V | A | L | A | E | A | A | Y | D | R | Y | G | F | K | D | F | K | L | K | G | G | V | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | G | E | D | E | I | A | A | V | T | A | L | S | E | R | F | . |
. |
. |
. |
. |
. |
. |
. |
P | D | A | R | I | T | L | D | . |
. |
. |
. |
Template Known Secondary structure |   |
B |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |
| S | S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | T | T | S |  |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 240 | . | |
|
|
|
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
|
|
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | Y | K | D | G | K | Y | V | L | A | G | E | G | N | K | A | F | T | S | E | E | F | T | H | F | L | E | E | L | T | K | Q | Y | P | I | V | S | I | E | D | G | L | D | E | S | . |
. |
. |
D | W | D | G | F | A | Y | Q | T | K | V | L | G | D | K | I | Q | L | V | G | D | D | L | F | V | T | N | T | K | I | L |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|
|   |   |   | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
| . |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|
|
|   | . | . | . |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | N | G | A | W | S | L | K | E | A | V | A | L | C | R | D | Q | . |
H | H | V | L | A | Y | A | E | D | P | C | G | A | E | N | G | Y | S | G | R | E | V | M | A | E | F | R | R | S | T | G | L | R | T | A | T | . |
. |
. |
N | M | I | A | T | D | W | R | Q | M |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T |
| B |
|  |  |  |  |  |  |  |  | T | T |
| . | T | T | T |
| S |  |  |  | S |
| B |
|
| B | T | T | B |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | S | S | S |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| . | . | . |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | |
|
|
. | . | . | . | . | 300 | . | . | . | . |
  |
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | E | G | I | E | K | G | I | A | N | S | I | L | I | K | F | N | Q | I | G | S | L | T | E | T | L | A | A | I | K | M | A | K | D | A | G | Y | T | A | V | I | S | H | R | S | G | E | T | E | D | A | T | I | A | D | L | A | V | G | T | A | A | G | Q | I |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|
|
|
|   |
|   |   |
|
|
|
|
|
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|   |
|
|   |   |   |
| . |   |   |   |
|
|
|   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   | . |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |   |
|   |
Template Sequence |   |
G | H | A | I | Q | L | Q | S | V | D | I | P | L | A | D | . |
P | H | F | W | T | M | Q | G | S | V | R | V | A | Q | M | C | N | E | W | G | L | T | W | G | S | . |
H | S | N | N | H | F | D | I | S | L | A | M | F | T | H | V | A | A | A | A | P | G | N |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|
| S |  |  | B |
|
| . | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| B |
| . |
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | |
. | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
  |