Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 32 Aligned Residues 305 % Identity 18% Template c3tj4B_ PDB info PDB header:lyase Chain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of an enolase from agrobacterium tumefaciens (efi2 target efi-502087) no mg Resolution 1.50 Å

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		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	A	L	I	G
Query Conservation												.
Alig confidence												.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	A	V	E	P	F	I	L	H	L	P	L	T	H	W	G	V	V	G	A	K	I	T	T	S	D	G	I	E	G	Y	G	F	T	G	T	H	A	H	L	P	S	D	R	L	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	I	S	D	C	Y	A	P	L	L	L	G
Template Known Secondary structure		B																										T	T	S																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T					T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																			.	.	.	.	.	.	.	.	.	60	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	.	.	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H
Query Conservation																														.	.
Alig confidence																														.	.																																.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		E	D	A	S	D	H	S	R	L	W	T	K	L	A	R	Y	P	S	L	Q	W	V	G	R	A	G	I	T	H	L	A	L	A	A	V	D	V	A	L	W	D	I	K	A	K	K	A	G	V	P	L	W	H	Y	L	G	G	A	R	T	A	.	.	.	.	.	.	G	V	E	A	Y	N	T	D	I	G	W	L	S
Template Known Secondary structure		S	B	T	T											T							T		S	S	S																						T	S	B					T	T			S		S	.	.	.	.	.	.								T	T			T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																		.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																		.	.	.	.	.	.	.
Template Sequence		F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	D	L	L	A	G	S	A	R	A	V	E	E	D	G	F	T	R	L	K	I	K	V	G	H	.	.	D	D	P	N	I	D	I	A	R	L	T	A	V	R	E	R	V	.	.	.	.	.	.	.	D	S
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T												.	.	S	S															S	.	.	.	.	.	.	.		T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																		.	.	.	.	.	.	.
Template SS confidence
		150	.																									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Sequence		A	V	R	I	A	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	G	K	W	D	L	P	T	C	Q	R	F	C	A	A	A	.	K	D	L	D	I	Y	W	F	E	E	P	L	W	Y	D	D	V	T	S	H	A	R	L	A	R	N	T	S	I	P	I	A	L	.	.	.	G	E
Template Known Secondary structure		T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T														T	.	T	T	S							S		S		T	T													S	S					.	.	.		T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template SS confidence
		197	.	.	200	.	.	.																		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G
Query Conservation
Alig confidence																																																								.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		Q	L	Y	T	V	D	A	F	R	S	F	I	D	A	G	A	V	A	Y	V	Q	P	D	V	T	R	L	G	G	I	T	E	Y	I	Q	V	A	D	L	A	L	A	H	R	L	P	V	V	P	H	A	G	E	M	.	.	.	.	.	S	Q	V	H	V	H	L	S	Y	W	H	P
Template Known Secondary structure		T			S										T	T			S						T	T	T	T	T															T	T			B					T	T	T	.	.	.	.	.	T	T	T									T
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.						310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions