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Job DescriptionP0A6P9
Confidence100.00%DateWed Jan 25 15:20:15 GMT 2012
Rank58Aligned Residues304
% Identity19%Templatec3sqsA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSKIVKIIGREII. . . . . . . . . . . . . . . . . . . . . . . DSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKS
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Template Sequence  MTKIKSVRTRVWNWTGPTVPPQGNFCTNASDALWIASFRFHQWLTCEVETEDGTIGIGNAAL. . . . . . . . . . . . . . . . . .
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   23......30.........40.........50.........60.........70.........80....
 
   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  RFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAEL
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Template Sequence  . . . . . APNVVKQAIDEWYAPLVIGEDPFDYAYLWEKMYRRTHAWGRKGIGMTAISAIDIAIWDLMGKLVGKPVFKLLGGR
Template Known Secondary structure  .....STTTTS
GGGTSSTT
BT

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   90.........100.........110.........120.........130.........140.........150.........160....
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  NGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLG
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Template Sequence  TKE. . . . . . KIPVYYSKLYADSIP. . . . . . . . . . . . . . . AMQAEAEEAQKHGYQGYKTRFGY. . . . . . . . . . . . . . . GPK
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   165.. ..170.........180.. .......190.........200..... ...
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  SNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESD
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Template Sequence  DGPAGMRENLKRVEALREVLGYDVDLMLE. . . . . . . . . . . . . . . . . CYMGWNLDYTKRMLPKL. ERFEPRWLEEPVIADD
Template Known Secondary structure  G
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   209210.........220.........230....... ..240.........250.... .....260.........270
 
   298.300.........310.........320.........330.........340.........350.........360.........370.......
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Query Sequence  WDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETED
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Template Sequence  VAGYAELNAMGIVPISG. . . GEHEFSVMGCAELINRKAVSVLQYDTNRVGGITAAQKINAIAEAAQIIVIPHA. . . . . GQ
Template Known Secondary structure  T
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   271........280....... ..290.........300.........310.........320.........330.........340 ..
 
   378.380.........
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Query Sequence  ATIADLAVGTAA
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Template Sequence  MHNYHLTMANMN
Template Known Secondary structure  T
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   343......350....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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