Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 44 Aligned Residues 315 % Identity 20% Template c3sjnB_ PDB info PDB header:lyase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of enolase spea_3858 (target efi-500646) from2 shewanella pealeana with magnesium bound Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.								.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																																																										.
Query SS confidence														.	.	.	.	.	.	.																																																										.
Query Sequence		M	S	K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	.	A	V	N
Query Conservation														.	.	.	.	.	.	.																																																										.
Alig confidence														.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	K	I	T	D	I	E	V	L	H	L	R	V	P	A	M	D	A	D	C	E	W	G	E	D	A	V	I	V	K	V	H	T	D	K	G	I	V	G	V	G	E	A	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	L	V	V	Q	A	C	I	E	A	P	Q	T	N	F	Y	C
Template Known Secondary structure				B											S	S		T	T	S				T	T	S										T	T	S								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	B	T	T	B
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		N	G	L	K	R	L	L	I	G	E	N	A	L	E	I	E	R	L	W	N	K	M	Y	W	G	S	N	Y	M	G	R	R	G	A	G	I	H	A	I	S	A	I	D	I	A	L	W	D	I	A	G	Q	F	Y	G	V	P	V	H	T	L	L	G	G	K	Y	R	D	.	.	.	.	.	.	K	I	R	C	Y	G
Template Known Secondary structure									T	T	S	B	T	T													T	T	T	T		S	S	T																						T	S	B					T	T			S		S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		T	F	I	P	A	D	K	P	E	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	I	V	Q	G	L	K	D	Q	G	F	S	S	I	K	F	G	G	G	V	M	G	D	D	P	D	T	D	Y	A	I	V	K	A	V	R	E	A	A	.	.
Template Known Secondary structure							S	S	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S						S	T	T	T	T	T																	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.																												150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	.	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K
Query Conservation																																						.
Alig confidence		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.													.
Template Conservation		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		.	.	.	.	.	G	P	E	M	E	V	Q	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	S	K	W	H	T	C	G	H	S	A	M	M	A	K	R	L	.	E	E	F	N	L	N	W	I	E	E	P	V	L	A	D	S	L	I	S	Y	E	K	L	S	R	Q	V	S	Q	K
Template Known Secondary structure		.	.	.	.	.		S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T		S											T	.	T	T	T	T		S					S	S		T	T										T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
							190	.	.	.	.	.	.	.	.																		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q
Query Conservation
Alig confidence					.	.	.																																																	.					.
Template Conservation					.	.	.																																																	.					.
Template Sequence		I	A	G	.	.	.	G	E	S	L	T	T	R	Y	E	F	Q	E	F	I	T	K	S	N	A	D	I	V	Q	P	D	I	T	R	C	G	G	I	T	E	M	K	K	I	Y	D	I	A	Q	M	N	G	T	Q	.	L	I	P	H	.	G	F	S	T	G	I	L	L	H	A	S	V	H	F	L	A	A	C	E	Q
Template Known Secondary structure					.	.	.		T	T																	S					B	T	T	T	S	S															T	T			.				B	.			S														T	S	T	T
Template Predicted Secondary structure					.	.	.																																																	.					.
Template SS confidence
		247	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		392	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions