Phyre 2 alignment of P0A6P9 with c3rr1B

Job Description P0A6P9
Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012

Rank 51 Aligned Residues 307

% Identity 17% Template c3rr1B_

PDB info PDB header:lyase Chain: B: PDB Molecule:putative d-galactonate dehydratase; PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j

Resolution 1.95 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence	M	S	K	I	V	K	I	I	G	R	E	I	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	A	L	I
Query Conservation
Alig confidence													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	M	V	K	I	T	R	L	T	T	Y	R	L	.	.	.	.	P	P	R	W	M	F	L	K	V	E	T	D	E	G	V	T	G	W	G	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	L	S	D	Y	L	I
Template Known Secondary structure													.	.	.	.	T	T	T									T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T													G	G	G	T	T
Template Predicted Secondary structure													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	0	.	.	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H	A
Query Conservation
Alig confidence																							.																																						.	.	.	.	.	.											.	.	.	.
Template Conservation																							.																																						.	.	.	.	.	.											.	.	.	.
Template Sequence	G	Q	D	P	S	R	I	N	D	L	W	Q	T	M	Y	R	A	G	F	Y	R	G	.	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	G	V	P	V	Y	E	L	L	G	G	L	V	R	D	.	.	.	.	.	.	K	M	R	T	Y	S	W	V	G	G	.	.	.	.
Template Known Secondary structure	T	S		T	T												S	S	S				.																								T	S	B					T	T			S		S	.	.	.	.	.	.											.	.	.	.
Template Predicted Secondary structure																							.																																						.	.	.	.	.	.											.	.	.	.
Template SS confidence
	54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.

	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K	D
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	D	R	P	A	D	V	I	A	G	M	K	A	L	Q	A	G	G	F	D	H	F	K	L	N	G	C	E	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	I	D	T	S	R	A	V	D	A	A	V	A	R	V	A	E	I	R	S	A	F	G	N	T
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	S	S													T	T	T								S	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B		S																	T	T	G	G	G
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.														.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L	F
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Sequence	V	E	F	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	.	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	T	Y	A	R	L	A	A	H	T	H	L	P	I	A	A	.	.	.	G	E	R
Template Known Secondary structure	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		B													.	G	G	G			S						S				S	S	S							T	T		S	S					.	.	.		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template SS confidence
	178	.	180	.	.	.																		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.

	321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	V	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	V	K	I	A	A	M	A	E	A	Y	D	V	A	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C	L	H	V	D	F	V	S	W	N	A
Template Known Secondary structure			S														S					B	T	T	T	T	T														T	T	T						B			S																T	T	B
Template Predicted Secondary structure
Template SS confidence
	237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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