Job Description P0A6P9 Confidence 72.45% Date Wed Jan 25 15:20:15 GMT 2012 Rank 235 Aligned Residues 86 % Identity 14% Template c3knzA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative sugar binding protein; PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		L	T	A	R	T	F	X	Q	R	W	C	A	L	P	V	D	V	C	W	P	F	X	L	D	D	E	T	L	A	R	S	.	.	.	.	.	.	.	G	K	A	L	V	V	G	I	S	Q	G	G	G	S	L	S	T	L	A	A	X	E	R	A	R	N	V	G	H	I	T	A	S	X	A	G	V	A	P	A	T	I
Template Known Secondary structure													T	S							G	G	G									S	.	.	.	.	.	.	.		S								S	S	S															T	T								S	S	S	S		G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I	A	D	L	A	V	G	T	A	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	A	A	D	Y	I	L	T	V	P	C	G
Template Known Secondary structure		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions