 |
Job Description | P0A6P9 | Confidence | 37.21% | Date | Wed Jan 25 15:20:15 GMT 2012 |
Rank | 349 | Aligned Residues | 95 |
% Identity | 15% | Template | c3g8rA_ |
PDB info |
PDB header:biosynthetic protein | Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; |
PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
|
Resolution | 2.49 Å |
|
 |
  |   |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | E | F | T | H | F | L | E | E | L | T | K | Q | Y | P | I | V | S | I | E | D | G | L | D | E | S | D | W | D | G | F | A | Y | Q | T | K | V | L | G | D | K | I | Q | L | V | G | D | D | L | F | V | T | N | T | K | I | L | K | E | G | I | E | K | G | I | A | N | S | I | L | I | K | F | N | Q | I | G | S | L |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |
|
|
| . | . | . | . |   |
|   |   |
|   |   |   |   |   |
|
|
|
|   |
| . |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
Template Sequence |   |
Q | P | E | Q | X | Q | K | L | V | A | E | X | K | A | N | G | F | K | A | I | C | T | P | F | D | E | E | S | V | D | . |
. |
. |
. |
L | I | E | A | H | G | I | E | I | I | K | I | A | S | C | S | . |
F | T | D | W | P | L | L | E | R | I | A | R | S | D | K | P | . |
. |
V | V | A | S | T | A | . |
G | A | R | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S |  |  |  |  |  | . | . | . | . |  |  |  |  | T | T |
|
|  |  |  |  |
| S | S | S | . | T | T |
|  |  |  |  |  |  |  |  | T | S |
| S |
| . | . |  |  |  |  |
| T | . | T |
|
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |
|
| . |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | |
. | . | . | . |
  |
  |   |
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | T | L | A | A | I | K | M | A | K | D | A | G | Y | T | A | V | I | S | H | R | S |
Query Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |
Template Sequence |   |
E | D | I | D | K | V | V | S | F | X | L | H | R | G | K | D | L | T | I | X | H | C | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|