Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 74 Aligned Residues 305 % Identity 19% Template c3fv9D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.									.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	.	.	.	.	.	.	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V
Query Conservation												.	.	.	.	.	.	.	.									.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.									.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	R	I	D	I	H	R	T	D	L	P	V	R	G	G	V	Y	R	L	S	G	G	R	E	Y	H	S	Y	D	A	T	I	V	S	I	E	T	D	T	G	L	T	G	W	G	E	S	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	S	T	Y	I	A	A	H	A	G	G	T
Template Known Secondary structure															B	S	S	S					G	G	G				S												T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S	S	S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																	.	.	.	.	.	.	.	60	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V
Query Conservation
Alig confidence																																			.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.																																		.	.	.	.	.	.
Template Sequence		R	A	A	L	E	L	L	A	P	A	I	L	G	M	D	P	R	Q	H	D	R	I	W	D	R	M	R	D	T	L	K	G	H	.	.	.	.	.	.	R	D	A	R	A	A	L	D	I	A	C	W	D	I	A	A	Q	A	A	G	L	P	L	C	D	M	T	G	G	R	V	A	G	.	.	.	.	.	.	P	V
Template Known Secondary structure													T	T	S		T	T														S	S		.	.	.	.	.	.																				T		B	G	G	G	T	T	T				S	S	.	.	.	.	.	.		B
Template Predicted Secondary structure																																			.	.	.	.	.	.																																		.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	I	S	S	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	P	E	A	M	R	A	K	V	A	R	H	R	A	Q	G	F	K	G	H	S	I	K	I	G	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	G	G	P	A	L	D	A	E
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.																	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																		170	.	.	.	.	.	.	.	.	.	180
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.
Template Sequence		R	I	T	A	C	L	A	D	R	Q	P	G	E	W	Y	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	N	G	L	T	V	E	H	A	L	R	M	L	S	L	L	.	P	P	G	L	D	I	V	L	E	A	P	C	A	.	.	S	W	A	E	T	K	S	L	R	A	R	C
Template Known Secondary structure								T	T			T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T														S	.		S	S										S	.	.	S									T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.														.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A
Query Conservation
Alig confidence								.	.	.																																																								.
Template Conservation								.	.	.																																																								.
Template Sequence		A	L	P	L	L	L	.	.	.	D	E	L	I	Q	T	E	T	D	L	I	A	A	I	R	D	D	L	C	D	G	V	G	L	K	V	S	K	Q	G	G	I	T	P	M	L	R	Q	R	A	I	A	A	A	A	G	M	V	M	S	V	Q	D	T	V	.	G	S	Q	I	S	F	A	A	I	L	H	L	A	Q	S
Template Known Secondary structure			S					.	.	.	S	T	T			S										T	T			S										T	S															T								S	S	.															T
Template Predicted Secondary structure								.	.	.																																																								.
Template SS confidence
		241	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		389	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	R	H
Template Known Secondary structure		S		T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions