Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 91 Aligned Residues 299 % Identity 16% Template c3eezA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.									.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	R	I	T	V	Y	Q	V	D	L	P	L	E	H	P	Y	W	K	F	E	L	L	D	A	T	L	V	K	L	E	T	D	A	G	I	T	G	W	G	E	G	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	H	T	Y	V	P	A	H	G	P	G	I	R	A	G	I	E	T
Template Known Secondary structure															B	S	S																		T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S	S	S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I
Query Conservation
Alig confidence																													.	.	.	.	.	.																																													.	.	.
Template Conservation																													.	.	.	.	.	.																																													.	.	.
Template Sequence		M	A	P	F	V	L	G	L	D	P	R	R	L	L	D	V	E	R	A	M	D	I	A	L	P	G	H	.	.	.	.	.	.	L	Y	A	K	S	P	I	D	M	A	C	W	D	I	A	G	Q	A	A	G	L	P	I	A	D	L	M	G	G	G	S	R	T	P	R	P	I	A	S	S	V	G	A	K	.	.	.
Template Known Secondary structure							T	T	S		T	T													S	S	S		.	.	.	.	.	.																			T	T	S	B					T	T					S				B	B			B		S		.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.																																													.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	E	T	R	A	V	I	D	R	Y	R	Q	R	G	Y	V	A	H	S	V	K	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	E	R	D	I	A	R	I	R	D	V	E	D	I	R	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	S		.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
																					143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L
Query Conservation
Alig confidence		.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.						.							.	.
Template Conservation		.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.						.							.	.
Template Sequence		.	.	.	E	P	G	E	I	V	L	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	R	G	W	T	R	Q	Q	A	L	R	V	M	R	A	T	.	E	D	L	H	V	.	M	F	E	Q	P	G	.	.	E	T	L	D	D	I	A	A	I	R	P	L	H	S	A	P	V	S	V
Template Known Secondary structure		.	.	.		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T														T	.	G	G	G	T		.						S	.	.	S	S							T	G	G	G
Template Predicted Secondary structure		.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.						.							.	.
Template SS confidence
					185	.	.	.	.	190	.	.	.																		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.		.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q	I
Query Conservation
Alig confidence		.	.	.																																																						.
Template Conservation		.	.	.																																																						.
Template Sequence		.	.	.	D	E	C	L	V	T	L	Q	D	A	A	R	V	A	R	D	G	L	A	E	V	F	G	I	K	L	N	R	V	G	G	L	T	R	A	A	R	M	R	D	I	A	L	T	H	G	I	D	M	F	V	M	A	.	T	G	G	S	V	L	A	D	A	E	A	L	H	L	A	A	T	I	P	D	H
Template Known Secondary structure		.	.	.		T	T			S										T	T			S										T	S														T	T								.	S	S		S													T	S		G	G
Template Predicted Secondary structure		.	.	.																																																						.
Template SS confidence
					241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions