Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6P9
Confidence90.05%DateWed Jan 25 15:20:15 GMT 2012
Rank194Aligned Residues117
% Identity14%Templatec3bleA_
PDB info PDB header:transferaseChain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290. ........300........ .310.........320.........330......
Predicted Secondary structure 







...



.....









Query SS confidence 


























. . .
















. . . . .



























Query Sequence  NKAFTSEEFTHFLEELTKQYPIVSIED. . . GLDESDWDGFAYQTKVL. . . . . GDKIQLVGDDLFVTNTKILKEGIEKGIA
Query Conservation      
  
 
     
   
 
  


...

   
  
   
    .....   
 




  

        
   
 
Alig confidence 


























...
















.....





...


















Template Conservation          
  
   

   

  



                              ...                
  
Template Sequence  GVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEI. . . LGFVDGNKTVDWIKDSGAK
Template Known Secondary structure  T



TT

STTS
TTTT
GGG...SSTTT

Template Predicted Secondary structure 





















...







Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80 .........90.........
 
   337..340........ .350.........360.........370 .........380....
Predicted Secondary structure 




............




....





Query SS confidence 











. . . . . . . . . . . .





















. . . .













Query Sequence  NSILIKFNQIGS. . . . . . . . . . . . LTETLAAIKMAKDAGYTAVISH. . . . RSGETEDATIADLA
Query Conservation    
 

  
 

............



      
   
   


 .... 



 
  




Alig confidence 











............





















....













Template Conservation   
      
          
           
  
   
  
                      
Template Sequence  VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLV
Template Known Secondary structure 
ST


TT
T
Template Predicted Secondary structure 
















Template SS confidence 































































   100.........110.........120.........130.........140.........150.........160...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions