Job Description P0A6P9 Confidence 72.70% Date Wed Jan 25 15:20:15 GMT 2012 Rank 233 Aligned Residues 209 % Identity 17% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G
Query Conservation
Alig confidence																																		.													.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																		.													.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		E	L	G	R	I	N	K	I	I	A	E	V	A	E	K	F	G	I	P	M	G	V	G	S	Q	R	V	A	I	E	K	A	.	E	A	R	E	S	F	A	I	V	R	K	V	.	.	.	.	.	.	.	.	A	P	T	I	P	I	I	A	N	L	G	M	P	Q	L	V	K	G	Y	G	.	.	.	.	.	.	.
Template Known Secondary structure																		T															G	.	G	G	S										.	.	.	.	.	.	.	.		S	S	S								G	G	G	G	T	T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.													.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L	F	V	.	.	T	N	T	K	I	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.					.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	K	E	F	Q	D	A	I	Q	M	I	E	A	D	A	I	A	V	H	L	N	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	Y	A	L	E	K	L	R	D	I	S	K	E	L	S	V	P	I	I	V	.	.	.	K	E	S	G	N	G	I	S	M	E	T	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.											T	T		S														S	S	S							T														S	S					.	.	.			S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																									.	.	.
Template SS confidence
											137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.					.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	.	.	.	.	A	V	G	T	A	A	G	Q	I	K	T	G	S	M	S	R	S	D	R	V
Query Conservation																																																										.	.	.	.
Alig confidence										.							.																																									.	.	.	.
Template Conservation										.							.
Template Sequence		K	L	L	Y	S	Y	G	I	.	K	N	F	D	T	S	.	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V	P	D	S	F	L	V	G	S	G	G	I	R	S	G	L	D	A
Template Known Secondary structure							T	T		.							.		B	T	S	B													T	T		T								T	T	T		S		B												S	T	T							S	S			S
Template Predicted Secondary structure										.							.
Template SS confidence
		205	.	.	.	.	210	.	.		.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Y	N	Q	L	I	R	I	E	E	A	L	G	E	K	A	P	Y	N	G	R	K	E	I	K	G
Query Conservation
Alig confidence					.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		A	K	A	.	.	.	.	.	.	.	I	A	L	G	A	D	I	A	G	M	A	L	P	V	L	K	S
Template Known Secondary structure					.	.	.	.	.	.	.				T		S
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		283	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions