Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 78 Aligned Residues 298 % Identity 16% Template c2rdxG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, putative; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from roseovarius nubinhibens ism Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	I	D	S	R	G	N	P	T	.	.	.	.	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	A
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	T	R	I	R	L	Y	K	T	D	L	P	Y	V	D	G	T	V	A	R	A	S	V	V	V	I	D	T	D	A	G	L	Q	G	C	G	E	F	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	E	N	Y	M	I	A	H	S	E	G	V	D	A	F	A	R	L	A	A	P	Q
Template Known Secondary structure															B	T	T														T	T									B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T	S	S	S			T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E
Query Conservation
Alig confidence																									.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template Sequence		L	L	G	Q	D	P	R	Q	V	A	R	M	E	R	L	M	D	H	L	V	Q	G	H	.	.	.	.	.	.	G	Y	A	K	A	P	F	D	A	A	F	W	D	I	L	G	Q	A	T	G	Q	P	V	W	M	L	L	G	G	K	L	C	D	G	A	P	M	Y	R	V	A	P	Q	R	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S		T	T													S	S	S		.	.	.	.	.	.																				T		B					T	T			S		S	S			B							S	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	E	T	R	A	E	L	A	R	H	R	A	A	G	Y	R	Q	F	Q	I	K	V	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	Q	S	D	I	D	R	I	R	A	C	L	P	L	L	.	.	.	.	.	.	.	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													G	G	G	S	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
																	143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.								.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.						.								.	.																			.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.						.								.	.																			.	.	.
Template Sequence		P	G	E	K	A	M	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	Q	G	W	R	V	D	N	A	I	R	L	A	R	A	T	.	R	D	L	D	Y	.	I	L	E	Q	P	C	R	.	.	S	Y	E	E	C	Q	Q	V	R	R	V	A	D	Q	P	M	K	L	.	.	.	D
Template Known Secondary structure		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		S												T	.	T	T				.						S	S	.	.	S									T	T			S					.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.						.								.	.																			.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.																		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.		.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		E	C	V	T	G	L	H	M	A	Q	R	I	V	A	D	R	G	A	E	I	C	C	L	K	I	S	N	L	G	G	L	S	K	A	R	R	T	R	D	F	L	I	D	N	R	M	P	V	V	A	E	D	S	W	G	.	G	E	I	A	S	A	A	V	A	H	F	A	A	S	T	P	E
Template Known Secondary structure		T	T			S											T			S						T	T	T	T	T	S														T	T								S	B		.	S													T	S		G
Template Predicted Secondary structure																																																									.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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