Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 37 Aligned Residues 303 % Identity 25% Template c2qdeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of mandelate racemase/muconate lactonizing family2 protein from azoarcus sp. ebn1 Resolution 1.93 Å

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		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80
Predicted Secondary structure												.																																																																		.
Query SS confidence												.																																																																		.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	.	A	L	I
Query Conservation												.																																																																		.
Alig confidence												.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	K	V	E	V	I	P	I	S	T	P	M	K	R	I	D	G	V	L	L	K	L	H	S	D	E	G	L	V	G	I	A	D	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	W	Y	R	G	E	T	Q	D	S	I	T	S	M	I	C	D	F	F	A	P	K	V	L	L
Template Known Secondary structure																												T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T														T					T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H	A
Query Conservation
Alig confidence																							.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																																		.	.	.	.	.	.
Template Sequence		G	E	D	P	T	K	I	E	K	I	V	G	R	M	D	I	L	T	R	D	N	.	.	.	.	.	.	N	Q	A	K	A	T	V	D	F	A	L	H	D	L	V	G	K	R	F	G	V	P	V	Y	Q	L	L	G	G	K	T	I	E	.	.	.	.	.	.	R	I	P	L	G	L	V	L	G	A	G	E	P	E
Template Known Secondary structure		T			T	T														S	S		.	.	.	.	.	.																				T	S	B					T	T			S		S	.	.	.	.	.	.	S			B							S
Template Predicted Secondary structure																							.	.	.	.	.	.																																		.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K	D
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	E	A	L	A	V	L	R	E	G	F	H	F	V	K	L	K	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	K	A	D	I	A	M	V	A	E	V	R	R	A	V	.	.	.	.	.	.	.	G	D	D
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T		S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		148																	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L	F
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Sequence		V	D	L	F	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	G	A	W	T	Y	D	Q	A	L	T	T	I	R	A	L	.	E	K	Y	N	L	S	K	I	E	Q	P	L	P	A	W	D	L	D	G	M	A	R	L	R	G	K	V	A	T	P	I	Y	A	.	.	.	D	E	S
Template Known Secondary structure		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T															.	G	G	G			S						S		T	T										T	T		S	S					.	.	.	S	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template SS confidence
		190	.	.	.	.	.																		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q	I
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		A	Q	E	L	H	D	L	L	A	I	I	N	K	G	A	A	D	G	L	M	I	K	T	Q	K	A	G	G	L	L	K	A	Q	R	W	L	T	L	A	R	L	A	N	L	P	V	I	C	G	C	.	M	V	G	S	G	L	E	A	S	P	A	A	H	L	L	A	A	N	D	W	I
Template Known Secondary structure				S											T			S										T	S															T								.		S																	T	T	G
Template Predicted Secondary structure																																																				.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions